Halyomorpha halys (brown marmorated stink bug): 106682948
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Entry
106682948 CDS
T07536
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106682948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhal03041
]
106682948
Enzymes [BR:
hhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106682948
Spliceosome [BR:
hhal03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106682948
Complex B
106682948
Complex C
U2 SnRNP specific factors
106682948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
106682948
NCBI-ProteinID:
XP_014279591
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MSYHRGGDGQPKGFGFGGFHLMSKAERQAAVPPPPTAALSKQGYSTMSSITENALSATWG
IPKKRSKTEEEYFEEEDETPKLDYIPAPGSPTAFTGTEQSLGSDEEDPLDAYMADIENQV
KKESVPKPGKKNNAKDSSKGIRDDIESEDVEESYYRYIEENPRAGLQDEESDIEIEYDED
GNPIAPKKNKIIDPLPPIDHSTIEYEEFEKNFYIEHEEISSLTPDKMQDLRNTLGIRVSG
PNPPNPVTSFAHFGFDEALMKVIRKCEYTQPTPIQAQAVPAGLSGRDIIGIAKTGSGKTA
AFIWPLLVHIMDQKELAVGDGPIGLILAPTRELSQQIYNEARKFGKVYNINVVCAYGGGS
KWEQSKALEEGAEIVVATPGRMIDLIKVKATNLQRVTFLVLDEADRMFDMGFEPQVRSIC
NHVRPDRQTLLFSATFKKKVKRLAQDVLIDPVRIVHGEEGGEANEDITQVVIVLQQSNKL
PWLLAHLVSFQSNGSVLIFVTKKINAEELAEQLKLQQIESLLFHGDMDQVERNRVITAFR
KKEVDIMVATDVAARGLDISHIRTVINYDMAKDIDTHTHRIGRTGRAGEKGTAYSLVTST
DKEFAGCLVRNLEGAGQEVPAPLLELAMQSAWFRKTRFKSGKGKSIGDKAGLGFRERPGL
GSSTSSGIPSAPSNIRPSMSISELMPKTSRGPAMDRLQAMKAAFRAQYQAQFTASEDHTW
EQTLDNPDGAPRVKKGPLPEKKVKKSRWDNP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcacaggggtggagatggccaacctaagggttttggttttggtggatttcat
ttgatgagcaaagcagaaaggcaggctgcagtgcctcctccaccaactgcagcacttagt
aagcagggttactctactatgagttccattacagagaatgcattatctgcaacttggggt
attcctaagaagagatccaaaacagaagaagagtattttgaagaagaagatgagacacca
aaattggactacatcccagctcctggaagtcctacagcttttacgggtactgaacaatct
ttgggttctgatgaagaagaccctcttgatgcttacatggctgacatagaaaatcaggta
aagaaagaatcggttcccaaaccaggaaagaaaaataatgccaaagattcaagtaaagga
attcgtgatgatattgagtccgaagatgttgaggaatcatattacaggtacatcgaagag
aatccacgtgctggcttgcaggatgaagaatctgatattgaaattgaatatgatgaagat
ggaaaccctattgctccaaaaaaaaataagattattgacccgcttccacctattgatcat
tctacgattgaatatgaagaatttgaaaaaaatttctacatcgaacatgaggagatttca
tctttgactcctgataagatgcaagaccttagaaatactttgggcattagggtatctgga
cccaatccacctaatcctgtcaccagttttgcacattttggatttgatgaagctcttatg
aaagttataaggaagtgtgaatacacccagcccactcctatccaggctcaagctgttcct
gcagggctttctgggcgagatattattggaattgctaaaactggaagtggtaaaacggct
gcttttatatggccccttcttgtccatatcatggatcagaaggaattagctgttggagat
ggaccaataggtttgattttagctcccacaagggaactttctcaacagatttataatgaa
gcacgaaaatttggcaaagtttacaacattaatgtagtttgcgcttatggtggtggctca
aagtgggaacagtccaaagcccttgaagaaggggcagaaatagttgtagctacccctggt
cgtatgattgatctcatcaaagtgaaagctaccaaccttcaaagagttacatttctagtc
ctggatgaagcagacagaatgtttgacatgggctttgaacctcaagtgagatcaatatgc
aatcatgtacgtcctgaccgacagactcttttattttctgcaacatttaaaaaaaaagta
aagcgtctagctcaagatgtgctgatagatccagtaaggatcgttcacggtgaagaaggc
ggagaagctaacgaagacattacacaagttgttattgtccttcaacaaagcaacaaactt
ccatggctgttggcccatttagtttcttttcaatctaatggctctgtactaatatttgtt
actaaaaagattaatgctgaagagttagctgagcagctaaaacttcagcaaattgagtca
ttactgttccatggtgatatggatcaagttgaaaggaatagggttataactgcattccgt
aaaaaagaagttgatataatggttgcaacagatgtagcagcaagaggcttagatatctct
catattagaactgtaataaattacgatatggcaaaagatattgatacacatactcacaga
atcgggcgtacaggtagggctggagagaaagggacagcttattcattagttacgtctaca
gataaggaatttgcaggttgccttgttcggaatttagaaggtgctgggcaagaggtccca
gctccattacttgaacttgccatgcagagtgcatggttccggaagacaagattcaaatct
ggaaaagggaagagtataggggacaaagctggacttggatttagggaacggccaggattg
ggaagcagcaccagtagcggtataccttctgctccttcaaatattcgaccctccatgagt
atatcagaattaatgccaaaaacaagtcgaggcccagcaatggataggttacaagctatg
aaagcagcatttagagctcagtatcaagcacagttcacagcctctgaggaccatacgtgg
gaacaaacactagacaaccctgatggagcaccaagggtaaagaaaggacccctcccagaa
aagaaggttaaaaagagtcggtgggacaatccatag
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