Halyomorpha halys (brown marmorated stink bug): 106684892
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Entry
106684892 CDS
T07536
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106684892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106684892
Enzymes [BR:
hhal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106684892
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106684892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
106684892
NCBI-ProteinID:
XP_014282697
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MVEATRKNFEDVLNELQYEIKNCSFFSLDCEFTSLPGDKYFENSFFDSGEDRFNKIRNNL
DHALILQVGITPFKYNRDLKHYRANPFKFYVFPRVFGPFDVSFLCKSATVQFLCNHKFDF
NKGFYQGISYLNRNDKESILKLLYNGKLLSSLEENFNHEEINEILRICDLVNKWTGSSSK
GSTIDFPIDPFNDSFNYLLQERIRMFNNQVWTYYEQDKIVVKNITKHERLEFEEKEKLPH
VKEKFIDSLLGFTKVFNLLASSKKPLVGHNLYFDLLIMYHQFYEDLPANYFKYKENLNRL
FPCIFDTKFLSYQLHRTTKQTLLLKNSLGSLYELFQDVDTRYYQPYVQLDPKSIYSDSVE
QKKHDAGWDSYMTGFAFLKLADEFAQIKRNIKVTDDLTFIELLASIKDHQNKINIARAKV
SYVNLQGKDPPSTRPPLLHVERIGKQLLTKLELDVFFKKYEPVHKKLLNNNSALIAVPNF
SSFKTILNDFHNSELLKVEKYSIARHNASIRACFAVVIIVPLVLAAWAGYKFK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagctactagaaaaaattttgaagacgttcttaatgaattgcagtatgaaatt
aaaaactgctccttcttttctttagattgtgaattcacttcactaccaggagataaatat
tttgaaaatagtttctttgattctggagaagacaggttcaataaaattcggaataattta
gaccatgcacttattcttcaagtagggattactccattcaaatacaatagggacttgaaa
cattacagagctaatccatttaagttctatgtttttccaagagtttttggaccatttgat
gtttcattcctgtgtaaatctgcaactgttcaattcctttgcaatcataaatttgatttt
aacaagggattttatcaaggaatttcatatttaaatcggaatgataaggaatccatatta
aaactcctttataatggcaaattgttgagttctttagaagagaactttaaccatgaagag
atcaatgaaattcttagaatttgcgatcttgtcaataaatggacagggtctagttcaaag
ggcagtactattgacttccctattgatcctttcaacgattcttttaattatttattacaa
gagaggattcgtatgtttaataatcaagtctggacctactatgaacaagataagatagtg
gttaaaaatataaccaaacatgaaagattggaattcgaagaaaaggaaaaacttcctcat
gtcaaagaaaaattcattgattcactcttaggttttacaaaggtttttaatttgttagca
tcttcgaaaaaaccattagtaggccataatttatactttgatcttttaattatgtatcat
cagttttatgaagatctgccagctaattattttaaatataaagaaaatttaaacagatta
tttccatgtatattcgatacgaaatttctcagttaccaattacatcgtactacaaaacaa
acactcttactgaagaactcacttggcagtttatatgaactatttcaagatgtagatacc
agatactatcaaccttatgttcagcttgatcctaaaagtatttattcagattctgtagaa
cagaaaaaacatgatgctggttgggattcatatatgacaggttttgcctttttgaaacta
gccgatgagtttgctcagataaagagaaatatcaaggttactgatgacctaacattcatc
gaattacttgccagtataaaggaccaccaaaacaaaatcaacattgccagggccaaagtt
tcatatgtgaatctgcaaggtaaggatccaccttctacaagacctccacttcttcatgtt
gagaggattggcaagcaactgctcactaaactagagttggatgttttttttaaaaaatat
gaacctgttcataaaaagctcctgaacaataattcagctttaattgcagttcctaatttt
tcaagcttcaaaactatattgaatgactttcataattcagaattattaaaagtggagaag
tactctatagctcggcataatgctagtatcagagcttgttttgcggttgttatcatcgtt
cctctagttttggcagcttgggctggttacaaatttaaatag
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