Halyomorpha halys (brown marmorated stink bug): 106685630
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Entry
106685630 CDS
T07536
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106685630 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106685630 (fand)
03041 Spliceosome [BR:
hhal03041
]
106685630 (fand)
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106685630 (fand)
Spliceosome [BR:
hhal03041
]
Complex B
Other components
Prp19-related factors
106685630 (fand)
Complex C
106685630 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
Mad3_BUB1_I
TPR_12
TPR_15
TPR_8
RPN7
ARM_TT21_C
ARM_TT21
PPR
TPR_10
NRDE-2
DHR-2_Lobe_A
Mad3_BUB1_I_2
TRPM_tetra
Motif
Other DBs
NCBI-GeneID:
106685630
NCBI-ProteinID:
XP_014283912
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MPVYQERKPKIVINEDDLPYEEEILRNPFSIKHWLRYIEFKKDAPKNGVNIIYERALKEL
PGSYKLWYNYLILRKRQIKGRCITDPSFEHLNNTYERSLVFMNKMPRIWMEYCQFLVDQC
KITKARHVFDRSLRALPITQHHRIWPLYIKFLKKHNIPETAVRVFRRYLKLCPEDTEEYI
DYLTAIGRLDEAAVRLADIVNTDDFVSKHGKSNHQLWTELCDLISKNPQEVRSLNVDAII
RSGLKKYTDQLGHLWNSLADYYIRSGLFEKARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVSQKAFPTDDDDIDIELRLARFEDLIERRLLLLNSVLLRQNPHNVHEWLKR
VQLFEGKPHDIIYTYTEAVQTVDPKLAVGKPHMLYVNFAKFYEENGQVEDSRIVLEKGTQ
VPYTKVEDLASVWCEWAEMEIRNENCDEALKILQRATIMPARKVDYHDDSETVQMRLYKS
LKIWSLYADLEESFGTFKSCKSVYDRIIDLKIATPQIIINYGLFLEEHNYFEEAFRTYEK
GIALFKWPNVFDVWNTYLTKFLKRYGGGKLERTRDLFEQCLENCPPKYAKGFYLLYAKLE
EEHGLARHAMAVYERATSAVLPEEMFEVFNIYIKKAAEIYGVPKTRQIYEKAIEVLGEDN
SREMCLRFAEMETKLGEIDRARAIYAHCSQMCDPRVTSTFWQTWKDFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSAASNVSGTVADLAPGAKDGMRMLEAKAAEMTVTTKS
GSSAIMFVRGETQNTSQEVQKEINNPESLNVDSDDEEENLEDDDLPVEKQIIPDEVFCGL
KKGSDSD
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccagtttatcaagaaagaaaacctaaaattgtaattaatgaagacgatttgccttat
gaagaagaaattttacgaaatcctttttctattaaacattggttaagatacattgaattt
aagaaagatgccccaaaaaatggggtaaacataatttatgaaagagccctaaaagagctt
cctggaagttataaactgtggtataactatttaatactaaggaaaagacagattaaagga
cgatgcattactgatccttcttttgaacatttaaataatacatatgaacgttctttggtt
tttatgaataagatgcctagaatatggatggaatattgccagtttcttgttgatcagtgt
aagattactaaagcacgacatgtatttgatagatccttaagggcattgccaatcacccaa
catcatcgcatttggcctctttacataaaattcttaaagaagcacaacattccagaaact
gcagtccgtgtttttcgaagatatctgaagctctgccctgaagatacagaagaatacatt
gattacttaactgcaattggtcgtttagatgaggctgctgttagattagctgatattgta
aatactgatgattttgtttcaaagcatggaaaatcaaaccatcaattatggactgagtta
tgtgatttaatctctaaaaatcctcaagaagttaggtctcttaatgtggatgcaataata
aggagtggtttgaaaaaatatactgaccaattaggccatctatggaattccttagctgat
tattatatcagaagtggactatttgaaaaggcaagagatatttatgaagaagcgatacaa
actgttactactgtcagagattttactcaagtttttgatgcttatgcccagtttgaagaa
ctttctttgagtaagaaaatggaagaagtttctcaaaaagcttttcccactgatgatgat
gatatagacatcgaacttcgcttggcaaggtttgaagatttgattgaaagaagattattg
cttctaaattcagttctcttgcgacaaaatcctcataatgttcatgaatggttgaaaaga
gtccagctttttgaaggaaaaccacatgatattatttatacttacacagaagctgtccaa
acagttgacccaaaattagctgttggaaaaccacacatgctttatgttaattttgcaaaa
ttctatgaagaaaatggccaagtagaagattctagaatagttcttgaaaaaggaacacag
gtgccttatactaaagtggaagatcttgcatctgtgtggtgtgagtgggcagagatggaa
attagaaatgagaattgtgatgaagctttgaaaattcttcaaagagcaactatcatgcca
gctagaaaagttgattatcatgatgactctgaaactgtgcaaatgagattgtataaatca
ttaaagatatggtccctgtatgctgatttggaagaaagctttggaacattcaaatcttgt
aaatcagtctatgacaggataattgatctgaaaattgccactcctcaaattatcatcaac
tatggtcttttccttgaagaacataattattttgaagaagcatttaggacttatgaaaaa
ggaattgctttgttcaaatggccaaatgtttttgatgtgtggaatacatatttaaccaaa
tttttaaagcgttatggaggaggtaaacttgagagaacaagagatctatttgaacagtgt
ttggaaaattgccctccaaagtatgcaaaaggcttttacctattatatgcaaaattagaa
gaagaacatggattagccaggcatgcaatggcagtctatgaaagggcaacttctgctgtg
ttaccggaagaaatgtttgaggttttcaatatttatatcaaaaaggcggctgaaatttat
ggtgttcctaaaactcgtcaaatttacgaaaaagctattgaagtattaggtgaagataat
tcaagagaaatgtgtcttaggtttgctgaaatggaaactaaattaggagaaattgatcga
gctagagcaatttatgcacattgtagccaaatgtgtgatcctcgagtcactagtacgttt
tggcaaacatggaaagattttgaagtgcgtcatggcaatgaggataccatgagagaaatg
ttgcgaattaaaaggagtgtacaagctacatataacacacaggtcaatatgatgtctgca
cagatgttatctgctgcaagtaacgtttctggaacagttgctgatcttgctcctggtgct
aaagatggaatgcgcatgttggaagctaaagccgctgaaatgactgtaactacaaaatct
ggttcatcggcaatcatgtttgtaagaggtgaaactcaaaacacctctcaagaagtccag
aaggaaataaataatcctgaatctttgaatgttgactcggatgatgaagaagaaaacttg
gaggatgatgatctacctgtagaaaagcaaattattcctgatgaagtgttttgtggcctg
aagaaaggaagcgattctgactga
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