Halyomorpha halys (brown marmorated stink bug): 106685713
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Entry
106685713 CDS
T07536
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106685713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhal03041
]
106685713
Spliceosome [BR:
hhal03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106685713
Complex C
U5 SnRNP specific factors
106685713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Ge1_WD40
RMC1_N
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
106685713
NCBI-ProteinID:
XP_014284020
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MKRKGNELVAYDNERAIKRLHEDGVKRTTNLLAPIMVLEGHQGDIFGLKFHPDGKYLAST
GFDRQIFIWNVYGECEHISTMMGHSGAVMEIQFSTDGNTLFTCSTDNTVAMWDLIAGQRV
KKLKGHSGFVNSCHPTRRGTQLIVSGSDDCSIKVWDPRKKGKATTLVNPYQVLTVSFNDT
AEQVFSSGIDNEIKVWDLRSNNSVIKLRGHTDTVTGLSLSSDGSYLLSNSMDNTLRIWDV
RPYAPPERCVKILSGHQHNFEKNLLRCSWSADGSKVSAGSGDRFVYVWDTTTRRILYKLP
GHNGSVNEVQFHPTEPIVGSASCDKTIYLGELED
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaaggaaacgaattagtcgcttatgataacgagagagctattaaacgtctt
cacgaagatggtgttaaaaggacaaccaatttattagcccctataatggtattagaagga
catcaaggagatatttttggtttgaagtttcatcctgatggaaaatatctggcttcaact
gggtttgatagacagatatttatttggaatgtttatggagagtgtgagcatatttctaca
atgatgggacattctggagctgtcatggaaatacagttttctactgatggaaacacactt
ttcacatgcagcactgataatacagttgcgatgtgggacttaattgctggacaaagggtt
aaaaagttaaaaggtcattctgggtttgtcaattcttgtcatccaactagaagaggaaca
caactaatagtaagtggctcagacgactgttcaattaaagtatgggacccgaggaagaaa
ggtaaagccacaacacttgtcaacccttatcaagttctcacagtttcttttaatgacaca
gctgaacaagtattttcttctggaattgataatgaaatcaaggtttgggatttgagaagt
aataatagtgtcataaagttaagagggcatacagataccgttacggggttgtctctttct
tctgatggctcttaccttttaagtaactcgatggacaacacattacgtatatgggatgtt
cgtccttatgcacctcctgagaggtgtgtaaaaatattatctggtcatcaacataatttt
gaaaagaacttgctaaggtgctcatggtccgcagatggatccaaagtttctgctggatct
ggagatagatttgtttatgtttgggatacgacaacaaggagaattttatataaacttcct
ggacataatggcagcgtcaatgaggtccaatttcatcccacagaaccgattgttggctct
gcatcatgtgataaaactatttacctgggtgaactagaagattga
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