Halyomorpha halys (brown marmorated stink bug): 106686255
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Entry
106686255 CDS
T07536
Symbol
Clp
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106686255 (Clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhal03021
]
106686255 (Clp)
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106686255 (Clp)
Transcription machinery [BR:
hhal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106686255 (Clp)
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106686255 (Clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
zf-CCCH_RBM22
zf-CCHC
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
106686255
NCBI-ProteinID:
XP_014284934
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MEAVVASVDNIRFDIEIALEQQHGALPLPFPGMDKSIVAVCEFYAKGSCAKGTACPLRHV
RGDRTIVCKHWLRGLCKKGDHCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESK
MKDCPWYDRGFCRHGPNCRHRHVRRVLCMNYLAGLCIDGPDCKFMHPRFELPAADATQRD
PKKLLIVCHFCGDPGHKALFCHKMPQEMRENEARLQEQRAANGEDGQIPASLLKSGLKPL
EEVTCYKCGCKGHYANKCPKGHLAFLTLSQAQKKAAQS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgttgtagctagtgtagataatataagattcgatatagaaatagcgttagag
caacaacatggagctttacctttgccttttcctggcatggataaatctattgtggctgtc
tgtgaattttatgccaaaggaagttgtgccaaaggcactgcatgtcctttgcgacatgtt
agaggggatagaaccattgtttgtaagcattggctgagaggtctatgtaaaaagggtgat
cattgcgagtttttacatgaatatgatatgactaaaatgcctgagtgttacttctattca
cgtttcaatgcgtgtcacaacaaggaatgccctttccttcacattgatccagaaagtaaa
atgaaggattgtccttggtatgatagaggtttctgtaggcatggtcctaattgtaggcat
cgacatgtcaggagagtattatgtatgaattatttggctggtctttgcatagatggaccc
gattgcaaatttatgcacccaagatttgagcttcctgcagctgatgccacccagagagac
cccaaaaagttgttgatagtgtgtcatttttgcggagatcctggacataaagcactcttc
tgtcataaaatgcctcaagaaatgagagaaaatgaagctcgtttgcaagagcaaagggct
gccaatggggaagatggtcaaattcctgcttctttacttaagtctggattaaaacctctg
gaggaagtaacatgttataagtgtggctgcaaaggacattatgccaacaagtgccctaaa
ggtcatctggctttcctcaccctcagtcaagcacaaaagaaagcagctcaaagctga
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