Halyomorpha halys (brown marmorated stink bug): 106686920
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Entry
106686920 CDS
T07536
Symbol
Isha
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhal03021
]
106686920 (Isha)
03041 Spliceosome [BR:
hhal03041
]
106686920 (Isha)
Transcription machinery [BR:
hhal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106686920 (Isha)
Spliceosome [BR:
hhal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106686920 (Isha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
106686920
NCBI-ProteinID:
XP_014286008
LinkDB
All DBs
Position
Unknown
AA seq
1540 aa
AA seq
DB search
MDAVKAFNSELSSLFEARPPISKAKMTAITRSAIKAIKFYKHAVQSVEKFVQKCKPEYKV
PGLYVIDSIVRQSRHQFSPEKDVFAPRFARNIQTTFAHLFNCPPDDKGKIVRVLNLWQKN
QVFTPDVIQPLLDMASRVGTDQPLQPSNGVQLKTPPTAQNLPRTPSSKPSPVKDPAWLSG
NLDTSSVSSQLAITPVPQVKPPTNSGAIDPNIMLQLQNLQSLLLEKQSDAAQYKKEEVKF
DKKLLDFDYDEDDEEPSVPQPSSQPQQPLPSIDSLQTILSNPEVLRHLQTLQQQMSNRKQ
EPTQEEIEDKMRRLQEMRHQEEEFDKHLAQTLPVSQTAVKFSSHTILSNLPFAAECDFKP
TVMENATDTLMSQAPPPVAPPQQLSSSMPAYSTPSTAHPFHGTILDQDLPTLDYDERNLP
SSARVDVEVIDLLRNDSPPRRSPPRSNRDSRRRRRSRSRNRHSRSRSRSRRRARSTSEDR
ETERRRKRGLPPIKKNHLAVCSTTLWIGHLSKLVTEEELSNTFGNYGEIVSINLIPPRGC
AFVCMNRRQDADKALRNLKHVKLHSKAITIAWAPGKAMKEKEWKDYWEVETGTSYIPWNK
LSHDTDFTLLEEGGMLDEETFPEWLKTDAALRRRGERKDRNDDFKNSQDPNSDIMLQSKK
DDHKKSDSALDIPMPAGNLPGFIPLPETTMAPPPVSQPATPMPPPPLGLIPPPFALPPQR
LPGLLGPMGPPMMGPMGNVPLGVPPPLMMPPPPQQMVPRMPGHFNPGPPVGMMPMPPGGD
KSKPPQMPGMPPDGFTDHIASMFGLPVSALTGMNLQQTLAQSQQQQMTKGAAEMEVDDPD
EKEIQNSNLEIMSALGTNMVGNFSQPPPNFGIHLNQNQTSQTSNQINTSFKGRSEGRSDS
RSEIRSDSRSDDRKSDKEDTPRKNRERDGKDRRDDRDRDKRRRRDSPERDRDRDRERRRG
GSDRGRRDWGGKGIRSSKWGDRDNDDERKDRKGNNNTPGGSNKENSERSSDDEMSEKKPQ
LPLASQQHEPDSPAMQFPPGIRPPGPQGPGGFGPRFGPPKNEDGHQMSMGMQGPPLGMGG
EFMSRDFQPIRGDFPPREFQPPLRGDFPPSRGDFQGPSRDFQGSRDYQGSRDFQGPPRDF
SGPPRDFPGNPRDFPGPPRDFPGPPRDFQGPPRDFQPRGEFQSPRGDFSPRFFGPRGPMR
PPMGPQQGSSRHRQPNGPMFGPQRGPPGPIGMRGPRVRMDGPPHGFMGRGFPSRMRGGPP
PRFGGPPVFNPVVSGNMGGGGPAGSRRWGEDDRPPRRSRWSSAPDGAQQSETDSEVPHSE
QLDNQHDIVDKNLEPEMPPGAEEATELPQKDLGSSDLPNESNAEFQPKESATEFTEEAGY
SEVNDVTDHADGSQSEFMENDNVQSCAVGGQPQKFGESHRKSRWSGVSTNDLVQPESLSE
SDISQPSNQPPLYSEAEKDTEVVKPPGEEDFVPADIGPSESQTNFSSEFFAAEATSELVE
STELSKINSVISDNADVHETGTEHIETNPTLDSAESTQKE
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtcaaggcttttaattcggagttatcttccttgtttgaagcaagacctcct
atatcgaaggccaagatgaccgccatcacgcgctcagcaataaaagcaataaagttttat
aaacatgctgttcaaagtgttgaaaaatttgttcagaagtgtaaaccagaatataaagtt
cctggattatatgttattgactcgattgtgcgtcaatctcgccatcaattctctccagaa
aaggatgtatttgcaccaaggtttgctcgtaacattcaaacaacatttgctcacttattt
aattgccctcctgatgacaagggtaaaattgttagagtattgaacctatggcagaaaaac
caagtgtttacaccagatgtgatccagccccttctggatatggcttctcgggttggaact
gatcaaccattacaaccttctaatggtgtgcagttgaaaacacctccgacagctcagaat
cttccccgaacaccaagttcaaaaccttctccagtaaaagatcctgcctggttgtcaggg
aatcttgatacaagcagtgtcagttcacagttggcaataacaccagttcctcaggttaaa
ccacctactaattccggggcgatagatccaaacattatgctacaattacaaaaccttcag
agcttgcttttggagaaacaatctgatgctgctcagtacaaaaaggaagaggtaaaattt
gacaaaaagctgcttgactttgattacgatgaagatgatgaagagccatcagtaccgcag
ccatcatcacagccccagcagcctcttccaagcatcgactctctgcaaacaattctgtct
aatcctgaggtactacggcatttgcaaactcttcaacagcagatgtctaatcgtaaacaa
gaaccaacccaagaagaaatagaagacaaaatgagaaggttgcaagaaatgaggcatcaa
gaagaagaatttgacaaacacctggcacaaactttacctgttagtcaaactgccgttaaa
ttttcatcgcatacaatattatcgaatcttcctttcgctgctgaatgcgatttcaagcca
acagttatggaaaatgcaacagatactttaatgtctcaggcacctcctcctgttgctccg
cctcagcagttgtcatcatcgatgcctgcatatagtactccttctactgctcatccattc
catggcacaattctggaccaagatcttccaaccctagattatgatgaaagaaatctacca
tcttcagcaagagttgatgttgaagtcattgatctccttcgaaatgattctccacctaga
agaagcccacctcgaagtaatcgtgatagcaggagacgccgaagatcaagatccagaaac
agacattcaagatctaggtctcgttcaagaagacgtgccagatcgacatcagaagaccgc
gagactgagcggagaagaaaaagggggctcccacccattaaaaagaaccatcttgcagtg
tgcagtacaacactctggattggtcatttatcaaaactggttactgaagaagaattatca
aatacattcggcaactatggtgagattgtctcaatcaacctaattcctcctaggggttgc
gcttttgtatgcatgaatcgaaggcaagatgcagataaggccttaagaaatttgaagcat
gtcaagcttcattctaaagctataacaatcgcatgggctcctggaaaagccatgaaagaa
aaagaatggaaggactattgggaggtcgaaacaggtacatcatatataccttggaataaa
ctatcacacgatactgattttactctgcttgaagaaggagggatgttggacgaggaaaca
tttcctgaatggctgaaaactgatgccgctttgagaagaagaggggaaaggaaagaccga
aatgatgacttcaaaaattcacaggatccaaattctgatataatgcttcagtctaagaaa
gatgaccacaagaaatcagattcagcattagacattcctatgccagcaggaaacttacct
ggattcatacctctccctgaaacaacaatggccccccctccggtttctcagcctgcaact
ccaatgcctccacctccgttagggctgataccaccaccttttgcattacctccacagcgg
ttaccaggacttttgggacccatgggacctccaatgatgggtccaatgggtaatgtacct
cttggtgtccctcctccacttatgatgcctccaccaccacaacaaatggttcctagaatg
cctggacatttcaatcctggtcctcctgttggtatgatgccaatgccacctggaggtgat
aaatcgaaaccaccacaaatgcctggtatgccacccgatggattcacagatcatattgct
tctatgttcggactgcctgtcagtgcactgactggtatgaatttacaacaaactctagca
cagagccaacaacagcaaatgactaaaggtgctgcagagatggaagtagatgatcctgat
gaaaaagaaatccagaattccaacttggaaatcatgtctgctcttggtacaaacatggtt
ggaaatttttctcaacctccaccaaactttggtatccatctaaaccaaaatcagacctct
caaacttcaaatcaaattaacacctctttcaaaggtcgaagtgaaggtaggagtgatagt
agaagcgaaataagaagtgatagtaggagcgatgatagaaaaagtgataaagaagataca
cctcggaaaaacagagaaagagatgggaaggaccgccgtgatgatagggatagagacaaa
agaaggagacgggattctccagagagagatcgagacagagaccgggaaaggagaagagga
ggaagtgacagaggacgaagggactggggtggcaaaggaattaggagcagcaagtggggt
gacagagataatgatgatgaaaggaaagacagaaaaggcaacaataatactcctggcgga
agtaataaagaaaatagtgaaagaagctctgacgatgaaatgtctgagaagaaacctcaa
ttgcccctagcttctcaacagcatgagcctgattcccctgcaatgcagtttccccctggt
attaggcctcctggtccacaaggccctggtggatttgggccaagatttggacctccaaag
aatgaagatggtcatcagatgagtatgggaatgcaaggtccacccttgggaatgggaggt
gaattcatgtcacgtgactttcaaccaattagaggagatttcccccctagagaatttcaa
cctcctctgagaggagatttccctccttcgagaggcgattttcaagggccttcacgagat
ttccaaggttcgagagattaccaaggttcacgagatttccaaggacctcccagagatttc
tccgggcctccaagagatttccctgggaatccaagagattttcctggacctccaagagat
ttccctggacctcctagagatttccaggggcctccaagagacttccagccaaggggtgaa
tttcaatctccaagaggagacttctctcccagattttttggaccaagaggacccatgcgc
ccaccaatgggtccgcaacaaggatcatctaggcatagacaacccaacggtccaatgttt
ggaccacagcgaggacctccgggcccaataggaatgcgaggacctcgagttcgtatggat
ggcccaccacatggatttatgggacgaggttttccatcacgcatgcgtggaggtccaccc
cctaggtttggtggtccacctgttttcaaccctgtcgtttctggtaatatgggtggtggt
ggtcctgcaggttctaggagatggggagaagatgatcgcccaccaaggaggtctcggtgg
tccagtgcaccagacggtgcacaacaatcagagacagattcagaagtgcctcattcagaa
caactagataatcaacatgatatagtagataaaaatttggaaccagagatgccaccgggt
gcagaggaagccactgaattaccacaaaaagatttaggttcatctgatctacccaatgaa
tctaatgctgaatttcaacctaaagagtctgcaactgaatttacagaagaggcaggatac
tctgaagtgaatgatgttactgatcatgctgatggttcacagtctgaatttatggaaaat
gacaatgtacaatcctgtgctgttggtggccaacctcaaaaatttggagaatctcatagg
aagtctcggtggtctggtgtatctactaatgatttggtccagccagaaagcctttcagaa
tcagatatctcccagccctctaatcaaccacctttgtattccgaggctgaaaaagataca
gaggtagtgaagccaccaggggaagaagatttcgtgcctgctgatattggtccttctgaa
tctcagactaatttctcttcagaattttttgccgcggaggcgaccagtgaattagtagaa
tctactgaacttagcaaaattaatagtgtaattagtgataatgctgatgttcatgaaact
ggaacagaacacatcgaaactaatcctactctcgacagtgctgaatcaactcaaaaggaa
tag
DBGET
integrated database retrieval system
