Halyomorpha halys (brown marmorated stink bug): 106688436
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Entry
106688436 CDS
T07536
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106688436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhal03041
]
106688436
03009 Ribosome biogenesis [BR:
hhal03009
]
106688436
Enzymes [BR:
hhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106688436
Spliceosome [BR:
hhal03041
]
Complex A
U2 snRNP components
U2 related factors
106688436
Complex B
106688436
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106688436
Ribosome biogenesis [BR:
hhal03009
]
Eukaryotic type
90S particles
Helicases
106688436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
ResIII
ABC_tran
AAA_25
TsaE
T2SSE
Motif
Other DBs
NCBI-GeneID:
106688436
NCBI-ProteinID:
XP_014288373
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MSKRRIEYIDPYVTKQSRMAAVPSTSVTSTTNVAPPATNTLKNSTSKNPFTGLPYTRRYY
EFYRKRIQLPVFEYRDEFMDLLHKHQCIVLVGETGSGKTTQIPQWCVEYSLSVGSKGVAC
TQPRRVAAMSVAQRVSEEMDVSLGQEVGYSIRFEDCSSAKTVLKYMTDGMLLREGMSDPM
LENYQVILLDEAHERTLATDILMGVLKEIIKQRSDLKLVIMSATLDAGKFQQYFDNAPLM
NVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIAGDVLLFLTGQEEIEEACKRIK
REIDNLGPEVGELKCIPLYSTLPPNLQQRIFEPAPPNKPNGAIGRKVVVSTNIAETSLTI
DGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAY
KNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALD
DDGNLTDLGAVMAEFPLDPQLAKLLITSCALNCSNEILSITAMLSVPQCFVRPNEAKKAA
DDAKMRFAHIDGDHLTLLNVYHAFKQNSEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDR
FNLKRTSTEFTSKDYYINIRKSLVTGFFMQVAHLEKTGHYLTIKDNQVVQLHPSTCLDHK
PEWVVYNEFVLTTKNYIRTVTDVKPEWLLKLAPQYYDLQNFPQCEAKRQLEILQERLDSR
QYQEGF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgccggattgagtatattgatccttatgtaacaaaacagagcaggatggca
gctgttccttctactagtgttacttcaactactaacgttgctcctcctgcgacgaatacc
ttaaagaatagtacatcaaaaaatccatttactggtcttccttataccaggaggtactat
gagttttacagaaaaagaattcaacttccagtttttgaataccgtgatgaatttatggat
cttttgcacaaacaccaatgtattgttcttgttggtgaaactggatctgggaaaacaacc
caaatcccacaatggtgtgtggaatattcacttagtgttggatctaaaggtgtagcttgt
actcagccaaggagggttgcagctatgtccgttgcacaaagagtttctgaagagatggat
gtgtctttaggtcaagaagttggttacagcataagatttgaagattgttcatcagccaaa
acagtattgaagtatatgactgatggtatgcttcttcgagaaggaatgtctgatcccatg
cttgaaaattatcaagtgatattattggacgaagctcatgaaagaacattagcaacagac
attcttatgggcgttcttaaagaaattattaaacagaggtctgatcttaagcttgtcatt
atgtctgccacccttgatgctggcaaatttcagcaatacttcgacaatgctcctttaatg
aatgttcctggaagaactcaccctgttgagatattttacactcctgaacctgaaagagat
tatttggaagcagctataagaactgtcatacaaattcatatgtgtgaagaaattgctggt
gatgtacttctgtttttgactggacaagaagaaattgaagaagcttgtaaaaggattaaa
agagaaattgataatttgggacctgaagttggagaattgaaatgtattccactttattca
actctgccacctaaccttcagcagcgtatatttgaacctgctcctcctaataagcctaat
ggtgctataggaagaaaagttgtagtgtcgactaacattgctgaaacttcacttacgata
gatggagtagtatttgtaattgacccaggatttgctaaacaaaaagtatataaccctcga
atcagagtggaatctcttcttgtttcacccataagtaaagcatcagcgcagcaaagggct
ggtagagctggaagaacgcgtcctggaaaatgttttaggttgtacactgaaaaggcttac
aaaaatgaaatgcaagacaacacatatccagaaattctcaggtcaaatctaggatctgtg
gttcttcagttaaaaaagcttggaattgacgatcttgttcattttgatttcatggatcca
cctgcaccagaaactctgatgagagctctagaactcctcaattacctagcagccttagat
gatgatgggaacttgactgacctcggagcagttatggcagaattcccgctcgatccacaa
ttggctaaactgctcatcacatcatgcgcactcaactgttccaatgaaatcctctctatc
actgccatgctatcagttccgcagtgtttcgttcggccgaacgaggcaaagaaggctgct
gatgatgcgaagatgcgctttgcgcacatcgatggggatcacttgactcttctcaatgtt
tatcacgcctttaaacaaaactcagaagacccacaatggtgctatgacaatttcgtcaac
tatagatctctgaagtctggggataatgtaaggcagcagttatcaagaatcatggaccgt
tttaacttaaaaagaacttcaacagagttcacatccaaagactactatattaacatcagg
aagtcacttgttactggtttctttatgcaggttgctcatctagagaagacgggtcattat
ttaacaatcaaagacaaccaggttgtgcagttacatccttctacctgtttagatcataaa
cctgaatgggttgtctacaatgaatttgtattgaccacgaaaaattatataaggacagta
acagatgttaaacctgagtggcttttaaagttagcacctcaatattacgatcttcagaac
tttcctcagtgtgaagctaaacgacagttggaaatacttcaagaaaggctagattccagg
cagtaccaagaaggcttctaa
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