Halyomorpha halys (brown marmorated stink bug): 106689989
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Entry
106689989 CDS
T07536
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106689989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhal03019
]
106689989
Enzymes [BR:
hhal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106689989
Messenger RNA biogenesis [BR:
hhal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106689989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
106689989
NCBI-ProteinID:
XP_014290708
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MEVTKLNFEEVFPDIVNDIENASFLCIDGEFTGLNNGHNVNAFDTPAESYLKIRAGSMDF
LFIQFGLSIFTQDEKTGRYKNKTYVFYLFPRPVNRLAPDTRFLCQTSSIDFLVSNNFDFN
KLFREGIPYLNSSDESQLADAMEVKRSYKANQVKDSSPQTIPVPKQFKSTIDSAMKKIDQ
VVNGKEIEVKIDKCSGFVRKLIYQTFEEKYKNVEGIILKSEGGGMLCKKGAEDLMEEKDA
KELAAAVGFSKVVREISAKGKLVVGHNMLLDVCHLVQRFLDPLPPDYNDFKEMIHTLFPK
IIDTKLICAEDAIKQTINGSTLEMLIDTMSKPPFHLPEIDGEEGYSYVLSDVKYHNAGYD
AFITGTVFLSLIRAIDPDNKTSSIKNCKPIEKYMNKLFLMKAPDTCMDLVNPDPEPSRDH
VFHVTFPKHWNANNIQKLFSPFGSTQLFWLSDTAAWVSLYQREESHKVMKALENSSKLPS
GVTVLSYQRFIREKGAAISPRPNKRKHGNENASEEGKRKKSSPNDMRSNRSNRKISPIPE
EVNSCELEVKKLEDSANIPGSEFDIDQSWG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaacaaaattaaattttgaagaagttttccctgatattgtgaatgatatagaa
aatgcatctttcctctgtattgatggtgaatttactggattaaacaatggtcataatgtt
aatgcattcgacactcctgctgaatcttaccttaagattcgtgcaggatccatggatttt
ctttttatacaatttggcctgtcaatttttactcaagatgaaaaaacgggaaggtacaag
aataaaacatatgtattttatctatttccaagacctgtcaacagactagctcctgacact
aggtttttgtgtcaaacctctagtattgattttttggtttccaataactttgattttaac
aaactatttagagaaggtattccatacttaaattctagtgatgaatcacaactagctgat
gctatggaagtaaaaagaagttataaagcaaatcaagttaaagacagctcccctcaaacc
atacctgtccctaaacaattcaaatcaacaattgacagtgcaatgaaaaaaattgaccaa
gttgttaatggtaaagaaattgaagttaaaatagataagtgttctggctttgttaggaag
ctcatttatcaaacttttgaagaaaaatacaaaaatgttgaaggcattattctgaaaagt
gaaggtggaggaatgttatgtaaaaaaggtgcggaagatttaatggaagagaaagatgct
aaagaactagcagctgctgttggtttttctaaagttgttcgtgagatttccgccaagggc
aaattggtagtcggtcataatatgttacttgatgtttgccacctcgtccagaggttccta
gatcctcttcctccggattataatgatttcaaagaaatgattcatacattatttccaaaa
ataattgataccaaacttatctgtgctgaggatgcaataaagcaaactattaatggaagt
actttggaaatgttaatagatacaatgtcaaaaccaccttttcatttaccagaaatagat
ggtgaagaaggatacagctatgtgttatcagatgtaaaatatcataatgctggctatgat
gcttttataactggaactgtttttctctctttaattagagcaatagatccagacaacaaa
acatctagcataaagaattgcaaaccaattgaaaagtatatgaataagttgtttcttatg
aaagctcctgatacatgcatggacctggtaaaccctgatcctgaaccgagcagggatcat
gtttttcatgttacatttccaaagcattggaatgcaaacaacatccagaaacttttcagt
ccttttggttcaactcagttgttttggttgagtgatactgctgcttgggtttcactttat
caacgtgaagagagtcataaagttatgaaggctttagaaaattcatctaagttgccaagt
ggtgtgactgtgttgtcctaccaaagattcattcgtgaaaaaggagctgccatttctcct
agaccaaataagaggaagcatggtaatgaaaatgcaagtgaagaagggaaaaggaaaaag
agttccccaaatgatatgagatctaacagaagtaatcgaaagattagtccaatacctgaa
gaggtcaacagttgtgaattagaggtgaagaaattagaagattctgctaatattcctgga
agtgaatttgatattgatcaaagctggggttaa
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