Halomonas halophila: QWG60_01500
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Entry
QWG60_01500 CDS
T09170
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hhao
Halomonas halophila
Pathway
hhao03030
DNA replication
hhao03410
Base excision repair
hhao03420
Nucleotide excision repair
hhao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QWG60_01500 (polA)
03410 Base excision repair
QWG60_01500 (polA)
03420 Nucleotide excision repair
QWG60_01500 (polA)
03440 Homologous recombination
QWG60_01500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhao03032
]
QWG60_01500 (polA)
03400 DNA repair and recombination proteins [BR:
hhao03400
]
QWG60_01500 (polA)
Enzymes [BR:
hhao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QWG60_01500 (polA)
DNA replication proteins [BR:
hhao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QWG60_01500 (polA)
DNA repair and recombination proteins [BR:
hhao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QWG60_01500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QWG60_01500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WJY07593
LinkDB
All DBs
Position
338534..341308
Genome browser
AA seq
924 aa
AA seq
DB search
MADTPIVLVDGSSYLYRAFHALPPLTTSEGLPTGAVKGVLNMLKRLIKDYPDSPMAVVFD
APGKTFRDELYAEYKAQRPPMPDDLRDQVQPLHDCVRALGLPLLCIQGVEADDVIGTLAR
HATEAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDVAGVKEKFGLPPERIIDFLALM
GDKVDNIPGVPGVGEKTALGLLQGMEGGLETVYADLEKVKTLGFRGAKTLPKKLEEHRDQ
AFLSYELATIKTDCELPVGLDDLDIAHPDRESLAELYRRLEFMAWLSELLEGKDKGVDDA
SSGEGAEGGESGGEREGESGGAEREDVVILEQADLDAWLARLKEAEAFCFDLETTSLDYM
EAEIVGVGLSLEPGEAAYIPLAHDYLDAPAQLDRKAVLEALTPLWADAGKAKIGQNLKYD
ISVLARHGIEVAGALEDTMLESYVLDSTATRHDMDSLALKYLGEKTVSFEDIAGKGVKQL
TFNQIALEQAAPYACEDVDITLRLHRELRPRVEAEGRLAEVLDRLERPLIRVLSRMERGG
VALDAERLHAQSQELGQRIGELEQQAFELAGREFNLGSPKQLGQILFEEQKIPVIKKTPK
GAPSTAEAVLEELALDYPLPKVIMEHRGLSKLRSTYTDKLPKLVNKATGRLHTSYHQAVT
ATGRLSSSDPNLQNIPIRTEQGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSGDKGLL
EAFAADRDIHAATAAEVFGVGLDKVSPDQRRSAKAINFGLIYGMSAWGLGRQLHIEQKQA
KTYIDRYFDRYPGVARYMERIRAQAAEDGFVETVLGRRLYLPEIHSQNRARRQGAERTAI
NAPMQGTAADIIKRAMIDVDAWLAEGEVDAMMVMQVHDELVFEVAEDAVDTFIPEVKRRM
QAAAELDVALIVEAESGVNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacccccatcgtcctcgtcgacggttcctcctatctctaccgcgcctttcac
gccctgccgccgctgaccacctccgagggtctgcccaccggcgccgtcaagggcgtgctc
aacatgctcaagcggctgatcaaggactaccccgacagccccatggcggtggtgttcgat
gccccgggcaagaccttccgcgacgagctctacgccgaatacaaggcccagcgcccgccg
atgccggacgacctgcgtgaccaggtccagccgctgcacgactgcgtgcgcgccctcggc
ctgccgctgctgtgcatccagggcgtggaggccgacgacgtcatcggcaccctggcgcgc
cacgccaccgaggccggacgcgacgccgtgatctccaccggcgacaaggacatggcccag
ctggtcaatgcccacatcaccctggtcaacaccatgaaggacgagaccctcgacgtggcc
ggggtgaaggagaagttcgggttgccgccggagcggatcatcgacttcctggcgctgatg
ggcgacaaggtcgacaacattcccggcgtgccgggggtcggcgagaagaccgccctgggg
ctgctgcagggcatggagggcggcctcgagaccgtctacgccgacctggaaaaggtcaag
acgctgggctttcgcggcgccaagacgctgcccaagaagctcgaggagcaccgcgaccag
gccttcctgtcctacgagctggccaccatcaagaccgactgcgagctgccggtgggcctc
gacgacctggacatcgcccaccctgaccgcgagtcgctggccgagctctatcgccgcctg
gagttcatggcctggctgtccgagcttctggaaggcaaggacaagggggtcgatgacgcc
tcgtcgggcgagggcgccgaaggcggcgagagcggtggagaacgcgagggcgagagcggc
ggcgccgagcgcgaggatgtggtgatcctcgagcaggccgacctcgacgcctggcttgcg
cgtttgaaggaggccgaggccttctgcttcgatctcgagaccaccagcctcgactacatg
gaggccgagatcgtcggcgtcgggctgtccctcgagcccggcgaggccgcctacatcccg
ctggcccacgactacctggatgcgccggcccagctcgatcgcaaggccgtgctcgaggcg
ctgacgccgctgtgggcggacgccggcaaggccaagatcggccagaacctcaagtacgac
atctcggtgctggcgcgtcacggcatcgaggtggcgggagccctcgaggacaccatgctc
gagtcctacgtgctggattccaccgccacccgccacgacatggactcgctggcgctcaag
tacctgggcgagaagacggtcagcttcgaggacatcgccggcaagggcgtcaagcagctg
accttcaaccagatcgccctggagcaggccgcgccctacgcctgcgaggacgtcgacatc
accctgcgcctgcaccgcgagctgcgcccgcgggtcgaggccgaggggcgcctggccgag
gtgctcgacagactggagcgcccgctgatccgggtgctgtcgcgcatggagcgcggcggc
gtggcgctggacgccgagcgcctgcacgcccagagccaggagctcggccagcgcatcggc
gagctcgagcagcaggccttcgagctcgccgggcgcgagttcaacctgggctcgcccaag
cagctcggccagatcctgttcgaggaacagaagatcccggtgatcaagaagacgcccaag
ggcgcgccgtccaccgccgaggccgtgctcgaggagctggcgctggactacccgctgccc
aaggtgatcatggaacaccgcggcctctccaagctgcgctccacctacaccgacaagctg
ccgaagctggtcaacaaggccaccggccggctgcacaccagctaccaccaggcggtcacc
gccaccgggcggctgtcgtcctccgatcccaacctgcagaacatcccgatccgcaccgag
caggggcgcaagatccgccaggccttcgtcgcgcggcccggctatcgcatcgtcgccgcc
gactactcgcagatcgagctgcgcatcatggcgcacctgtccggcgacaaggggctgctc
gaggccttcgccgccgaccgcgacatccacgccgccaccgccgccgaggtgttcggcgtg
gggctcgacaaggtctccccggaccagcgccgcagcgccaaggcgatcaacttcgggctg
atctacggcatgagcgcctggggcttgggccgccagctgcacatcgagcagaagcaggcc
aagacctacatcgaccgctacttcgaccgctatcccggcgtggcccgctacatggagcgc
atccgcgcccaggcggccgaggacggtttcgtcgagacggtgctcggccggcgcctctac
ctgccggagatccactcccagaaccgtgcccgtcgccagggcgccgagcgcaccgccatc
aacgcgcccatgcagggcaccgcggcggacatcatcaagcgcgccatgatcgacgtcgac
gcctggctggccgagggcgaggtcgacgccatgatggtcatgcaggtccacgacgaactg
gtgttcgaggtcgccgaagacgccgtcgacaccttcattcccgaggtgaagcggcgcatg
caggctgccgccgagctcgatgtggcgctgatcgtcgaggccgagagcggcgttaactgg
gacgaggcgcactga
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