Halomonas halophila: QWG60_04255
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Entry
QWG60_04255 CDS
T09170
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
hhao
Halomonas halophila
Brite
KEGG Orthology (KO) [BR:
hhao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhao03000
]
QWG60_04255
Transcription factors [BR:
hhao03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWG60_04255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
AAA
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WJY08129
LinkDB
All DBs
Position
937259..938848
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AA seq
529 aa
AA seq
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MSDHGVLDAAPAEAPALAGMAEALRLVEGHSPDELRRRGLALLRERLGLAWARCLFLDAS
GRWLGEDGDDAWLACDDFRHPYAHAIRRGEAMELGLGEARLRLDHPAFQAATEGLPAAWR
LSVRPLRARDGKREWLGVLALAGPAERLAPLAECDDFLAFEALLCRLWAWLARQRDERRH
QARLRDSLAEANDGARRRTLSERLAQRILGDSPAIGALRDQLVRAAETHLAVLLQGETGT
GKELVARGVHEVSARSDGPFMAINCAAIPESLLEAELFGHVKGAFSGAERSREGLFGQAD
GGTLFLDEIGDMPLALQAKLLRVLESGRYRPLGGDDERKVDLRLVAATHQPLHRRIREGA
FRADLYYRLGQFPLTLPALRERREDIPALARAFVDDFCRREGREDIGLGRAVLRALEARD
FPGNVRELRNLIDYACAMTRDGEDIAPEALPDEAPSAPVDDAATDATPAPAAEQDDVFDL
RRALRDYEATLIRQRLARFDGNRTLAAESLGLPKRTLAHKCRQLQLDSP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcacggcgtgctcgatgcggcacctgccgaggccccggcgctggccggcatg
gccgaggcgctgcggctggtcgagggccactcgcccgacgagctgcgccggcgcgggctc
gcgctgctgcgcgagcggctggggctggcctgggcacgctgcctgttcctcgacgccagc
ggccgctggctgggcgaggacggcgacgacgcctggctggcctgcgacgactttcgccat
ccctatgcccatgccatccgccgcggcgaggcgatggagctggggctcggcgaggcgcgg
ctgcggctcgatcatcccgccttccaggcggccaccgaggggctgccggcggcctggcgg
ctgtcggtgcgcccgcttcgcgcgcgggacggcaagcgcgagtggctcggcgtgctggcc
ctggcgggccccgccgagcgcctcgcgccgttggccgagtgtgacgacttcctggccttc
gaggcgctgctgtgtcgcctgtgggcctggctggctcgccagcgcgacgagcgccgccac
caggcgcgcctgcgcgactcgctggccgaggccaacgacggcgcccggcgccgcaccctc
agcgagcgcctggcccagcggattctcggcgactcgccggccatcggcgcgctgcgcgac
cagctggtgcgtgccgccgagacccatctggcggtgctgctgcagggcgagaccggcacc
ggcaaggagctggtggcgcgcggcgtgcacgaggtctcggcgcgcagcgacgggcccttc
atggcgatcaactgcgcggcgatccccgagagcctgctcgaggccgagctgttcggccac
gtgaagggcgctttctcgggcgccgagcgcagccgcgaagggctgttcggccaggccgac
ggcggcaccctgttcctcgacgagatcggcgacatgccgctggcgctgcaggccaagctg
ctgcgcgtgctcgaatcggggcgctatcgcccgctcggtggcgacgacgagcggaaggtc
gatctgcgcctggtagcggcgacgcaccagccgctgcatcggcgcatccgcgagggtgcc
ttccgcgccgacctctactaccgcctcggccagttcccgctcacgctgccggcgctgcgc
gagcgccgcgaggacattccggccctggcccgggccttcgtcgacgacttctgccggcgc
gagggccgcgaggacatcggcctggggcgcgcggtgctgcgtgccctcgaggcgcgcgac
ttccccggcaacgtgcgcgagctcaggaacctgatcgactacgcctgcgccatgacccgc
gacggcgaggacatcgcccccgaggcgttgcccgacgaggcgccctcggcgccggtcgac
gacgcggccaccgacgccaccccggcgccggcagccgagcaggacgacgtcttcgacctg
cgccgggcgctgcgcgactacgaggcgacgctgatccgccagcgcctggcgcgcttcgac
ggcaaccgcaccctggccgccgagagcctgggcctgcccaagcggaccttggcgcataag
tgccgacagctgcaactggatagcccatga
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