Halomonas halophila: QWG60_06965
Help
Entry
QWG60_06965 CDS
T09170
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhao
Halomonas halophila
Brite
KEGG Orthology (KO) [BR:
hhao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhao03032
]
QWG60_06965 (topA)
03400 DNA repair and recombination proteins [BR:
hhao03400
]
QWG60_06965 (topA)
Enzymes [BR:
hhao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QWG60_06965 (topA)
DNA replication proteins [BR:
hhao03032
]
Prokaryotic type
DNA Topoisomerases
QWG60_06965 (topA)
DNA repair and recombination proteins [BR:
hhao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QWG60_06965 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_Ribbon_TF
Toprim_4
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WJY08638
LinkDB
All DBs
Position
1512639..1515278
Genome browser
AA seq
879 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNEFIVKSSVGHIRDLPTSGSGKAASDPKERARQAAATR
KMSAEEKAEYRQRKSHEQLIRRMGIDPEHDWEANYEILPGKEKVVAELQKLAEKADTVYL
ATDLDREGEAIAWHLRETIGGDESRYRRVVFNEITKNAIHEAFEDPGQLNMPRVEAQQAR
RFLDRVVGFMLSPLLWAKIARGLSAGRVQSVAMRLIVEREREIRAFVPEEFWDVHADLKP
ADDASAEPVRFELARQDGKAFRPTSEAETLERIEGLRKASLAITSREDKPTRSKPNAPFI
TSTLQQAASGRLGFSVKKTMTLAQRLYEAGYITYMRTDSTNLSREAVDGVRDFIGEEYGE
RYLPEAPNRYTSKEGAQEAHEAIRPSEVTRRATDLAGMERDAERLYELIWRQFVACQMTP
AEYLSTTLTVAADGYELKAKGRVLKFDGYTRVMKPMGRKDEDQSLPDLAEGAALTLESLD
PQQHFTKPPARYTEASLVKELEKKGIGRPSTYAAIISTIQDRGYVTLENRRFYAEKLGDI
VTERLKESFPDLMDYSFTARMEDSLDEVAEGERRWRELLDAFYAEFREELDEAQSEEGMR
PNQPVPTDIDCPSCGRKMQIRTASTGVFLGCSGYNLPPKERCKTTIDLLPGDEAVAADAG
EDAETDALRAKHRCPKCGTAMDSYLIDEDRKLHVCGNSPDCDGYEVEQGKFRIKGYEGPT
IECDKCGSEMQLKSGRFGKYFGCTSESCKNTRKLLKNGEVAPPKMDPIPMPELACQKVED
HYVLRDGASGLFLAASKFPKNRETRPPLVIELKAHADELPDKYRYLLDAPDADPDGRPAQ
IRFSRKAKAQFLMTEDNGKATGWKATFDDGKWQVEDKRK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtctctggtcatcgtcgagtcgccggccaaggcgaagacgatcaacaagtat
ctcggcaacgagttcatcgtgaagtcgagcgtggggcacattcgtgacctcccgaccagc
ggctcgggcaaggcggcctcggaccccaaggagcgtgcccggcaggccgcggcgacgcgc
aagatgtccgccgaggagaaagccgaatatcgccagcgcaagtcccacgagcagctgatt
cggcgcatggggatcgaccccgagcacgactgggaagccaactacgagatcctgcccggc
aaggagaaggtggttgccgagctgcagaagctcgccgagaaggccgataccgtctatctc
gccaccgatctcgatcgcgagggggaagccatcgcctggcaccttcgcgagaccatcggc
ggcgacgagtcgcgctatcgtcgcgtggtgttcaacgagatcaccaagaacgccatccac
gaggccttcgaggaccccggtcagctcaacatgccgcgagtcgaggcccagcaggcacgg
cgcttcctggatcgcgtggtgggcttcatgctctcgccgctgctgtgggccaagatcgcc
cgcgggctgtccgccggccgcgtgcagtcggtggccatgcgccttatcgtcgagcgcgag
cgcgagatccgcgccttcgtgcccgaggagttctgggacgtccacgccgacctcaagccg
gccgacgacgcctcggccgagccggtgcgcttcgaactggcgcgccaggacggcaaggcc
ttccgtccgacctccgaggccgagaccctggaacgcatcgaggggctcaggaaggcgtcg
ctggccatcacctctcgcgaggacaagccgacccgctccaagcccaatgcgcccttcatc
acctcgaccctgcagcaggccgccagcggtcgcctgggcttctcggtgaagaagaccatg
acgctggcccagcgcctctacgaggccggctacatcacctacatgcggaccgactccacc
aacctctcccgtgaggcggtggacggcgtgcgcgacttcattggcgaggagtacggcgag
cgctatctgcccgaggcgcccaaccgctacaccagcaaggagggcgcccaggaggcccac
gaggcgatccgcccctccgaggtgacccgccgcgccaccgacctggccggcatggagcgc
gacgccgagcgcctctacgagctgatctggcgtcagttcgtggcctgccagatgacgccg
gccgagtatctctcgaccaccctgaccgtggccgcagacggctacgagctcaaggccaag
ggccgggtgctgaagttcgacggctacacccgcgtgatgaagcccatggggcgcaaggac
gaggaccagtcgctgcccgatctcgccgagggcgcggcgctgaccctcgagtcgctggat
ccgcagcagcacttcaccaagccgccggctcgctacaccgaagccagcctggtcaaggag
ctggagaagaagggcatcggccgaccgtccacctacgcggcgatcatctcgaccatacag
gaccgtggctacgtgaccctggagaatcggcgcttctatgccgaaaagctcggcgacatc
gtcaccgagcggctcaaggagtcgttcccggatctgatggactactccttcaccgcgcgc
atggaggacagtctcgacgaggtggccgagggcgagcgccgctggcgcgagctgctcgat
gccttctacgccgagttccgcgaggagctcgacgaggctcagagcgaggaaggcatgcgc
cccaaccagccggtgcccaccgacatcgactgcccgagctgcgggcgcaagatgcagatc
cgcaccgcctcgacgggcgtgttcctgggctgctccggctacaacctgccgcccaaggaa
cgctgcaagaccaccatcgacctgctgcccggcgacgaggcggtggccgccgacgccggc
gaggacgccgagaccgatgcgctgcgtgccaagcaccgctgccccaagtgcggcacggcg
atggacagctacctgatcgacgaggatcgcaagctgcacgtctgcggcaacagcccggac
tgcgacggctacgaggtcgagcagggcaagttccgcatcaagggctacgagggcccgacc
atcgagtgcgacaagtgcggcagcgagatgcagctcaagtccgggcgcttcggcaagtac
ttcggctgcaccagcgagagctgcaagaacacccgcaagctgctcaagaacggtgaggtc
gcgccgcccaagatggaccccatcccgatgccggagctggcctgccagaaggtcgaggac
cactatgtgctgcgcgacggcgccagcggcctgttcctggcggccagcaagttccccaag
aaccgcgagacccgtccgccgctggtgatcgagctcaaggcccacgccgacgagctgccg
gacaagtatcgctacctgctcgatgcgcccgatgcggacccggacggtcgcccggcccag
atccgcttctcgcgcaaggccaaggcgcagttcctgatgaccgaggacaacggcaaggcc
accggctggaaggccaccttcgatgatggcaagtggcaggtggaggacaagcgcaagtga
DBGET
integrated database retrieval system
