Halomonas halophila: QWG60_07300
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Entry
QWG60_07300 CDS
T09170
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hhao
Halomonas halophila
Pathway
hhao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWG60_07300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhao03019
]
QWG60_07300
03400 DNA repair and recombination proteins [BR:
hhao03400
]
QWG60_07300
Enzymes [BR:
hhao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWG60_07300
Messenger RNA biogenesis [BR:
hhao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWG60_07300
DNA repair and recombination proteins [BR:
hhao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QWG60_07300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJY08703
LinkDB
All DBs
Position
complement(1589957..1591906)
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AA seq
649 aa
AA seq
DB search
MTTIDQTLARVFGYPDFRPGQRPVIEAVVAGRSAAAIFPTGSGKSLCYQLSALHLPNLTL
VVSPLLALMQDQLAFLQRHGIAAASLDSSQTKDEARAVMDGVARGEIRILMVSVERLKNE
RFRAFIRRVPISLLVVDEAHCISEWGHNFRPDYLTLPATRHELGIPQALLLTATATPKVI
EDMRRHFAIEAEDVTATGFYRPNLDLQVAPVAADERPRRLVEWLRPRVEGPSAGATVVYV
TLQQTAERLAAYLGAAGLPAAAYHAGLDAETRARRQDDFMAGRTPVIVATIAFGMGIDKS
DIRAVVHFDLPKSVENYSQEIGRAGRDGAPAECLMLAGRDHLSVLENFTYGDTPERDAIA
RVTSTLPAAGEDWAFTLNTLSRDSDIRPLPLKTLLVHLELEGVIRPRFSYFAEYRFRLEE
PAEALVARFQGERRAFVEAILEASAKARTWYRMDLEALARLGAERGLDTSRQRVITALDY
FADKDLITLESKQMTEVFEVRRPVDEALIARLHQAFVDKERAEIERLHAMLALFEGEGCL
TRRLADWFGDAAAPERCGHCSGCRGQIASLPSPPPPAPLAAMDAAALTAPLRERLSAAGE
GEAATPTLLARFLCGLSSPRLTRHKARQLDGFATLEAYPFGEVRDWLSR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcgaccagaccctcgcccgggtcttcggctatcccgacttccgccccggc
cagcgcccggtgatcgaggcggtggtcgccggccgctcggccgccgcgatcttccccacc
ggctcgggcaagtcgctgtgctatcagctctccgccctgcacctgccaaacctgacgctg
gtggtctcgccgctgctggcgctgatgcaggaccagctggccttcctgcagcgccacggc
atcgccgccgccagcctcgattcctcccagaccaaggacgaggcccgtgcggtgatggac
ggcgtggcccgcggcgagatccgcatcctgatggtctcggtggaacgtctcaagaacgag
cgcttccgcgccttcatccgccgcgtgcccatctcgctgctggtggtcgacgaggctcac
tgcatttccgaatggggccacaacttccgtcccgactacctgaccctgccggcgacccgc
cacgagctcggcatcccccaggcgctgctgctgacggccaccgccaccccgaaggtgatc
gaggacatgcgccgccacttcgccatcgaggccgaggacgtcaccgccaccggcttctat
cgccccaacctggacctgcaggtggcgccggtggcggccgacgagcgcccgcggcggctg
gtcgaatggctgcgcccgcgcgtcgaagggcctagcgccggcgccaccgtggtctacgtc
accctgcagcagaccgccgagcgtctggccgcctatctcggtgccgccggcctgcccgcc
gcggcctatcacgccggcctcgacgccgagacgcgcgcccgccgccaggacgacttcatg
gccggccgcacgccggtgatcgtcgccaccatcgccttcggcatgggcatcgacaagagc
gacatccgcgcggtggtgcacttcgacctgcccaagtcggtggagaactacagccaggag
atcggccgcgccgggcgtgacggcgccccggccgagtgcctgatgctggccggccgcgat
catctcagcgtgctggagaacttcacctacggcgacaccccggagcgcgacgctatcgct
cgggtgacgtcgaccctgcccgccgccggagaggactgggccttcaccctcaataccctc
tcgcgggacagcgacatccgcccgctgccgctcaagacgctgctggtgcatctggagctc
gagggcgtgatccggccgcgcttcagctacttcgccgaataccgcttccgtctggaggag
ccggcagaagccctggtggctcgcttccagggcgagcgacgggccttcgtcgaggcgatc
ctcgaggcctcggcgaaggcgcgcacttggtaccggatggatctcgaggccctggcacgg
ctcggcgccgaacgcggcctggacacctcacgccagcgggtgatcaccgccctggactac
ttcgccgacaaggacctgatcacgctggaaagcaagcagatgaccgaggtcttcgaggtg
cggcgccccgtcgacgaggccctgatcgcgcggctgcaccaggccttcgtcgacaaggag
cgggccgagatcgagcgactgcacgccatgctggcgctgttcgagggcgaaggctgcctg
acccggcggctggcggactggttcggcgacgccgccgcccccgagcgctgcgggcactgc
tcggggtgccgcggccagatcgcgtcgctgccgtccccgccgccaccggcgccgctcgcc
gcgatggacgccgccgccctgaccgccccgctgcgcgaacggctctcggccgccggcgaa
ggcgaggccgccaccccgacgctgctggcccgcttcctgtgcgggctgagctcgccgcgg
ctgacccgccacaaggcgcgccagctcgacggcttcgccaccctggaggcctatcccttc
ggcgaggtgcgcgactggctgtcccgctga
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