KEGG   Halomonas halophila: QWG60_08190
Entry
QWG60_08190       CDS       T09170                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
hhao  Halomonas halophila
Pathway
hhao03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hhao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QWG60_08190 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhao03400]
    QWG60_08190 (uvrB)
DNA repair and recombination proteins [BR:hhao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QWG60_08190 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      QWG60_08190 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 DUF87 Kinesin Microtub_bd
Other DBs
NCBI-ProteinID: WJY08867
LinkDB
Position
1779992..1782013
AA seq 673 aa
MSKAFRLESKYRPAGDQPSAILGLVNGLDAGLAHQTLLGVTGSGKTYTMANVVERLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFNRGELIDQRAFLRRLAELQ
YTRNDLDFKRGTYRVRGDVIDIFPADAEDEAVRVELFDDEIDGISLFDPLTGEVRGKVPR
MTIYPKSHYVTPRETIMGAIDRIKEELAERLAFMRQHDKLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGREPGQAPPTFFDYLPSDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWERISPQTVFVSATPGPYEAEHAGQVVEQVVRPTGLLDP
ELEVRPASTQVDDLLSEIRERTAVEERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNERSLIQTIGR
AARNAHGKAVLYADRITDSMRRAMDETERRRAKQIAHNEEHGIVPETVHRSVADILEAAE
APGRKGKGRKSERKVAEGSAVYDPNDLGPAELAKEITRLEDAMSEAAQNLEFEEAARLRD
RLLELKERQLAVG
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagcaaggcattccgactcgagtccaagtaccggcccgccggcgaccagccttcggcc
atcctgggcctggtcaacgggctcgatgccgggctggcccaccagacgctgctcggcgtg
accggttcgggcaagacctacaccatggccaacgtggtcgagcgcctgcagcgcccgacc
atcgtcatggcgcccaacaagacgctggcggcccagctctacggcgagttcaagtcgttc
ttccccgacaacgccgtggaatacttcgtctcctactacgactactaccagcccgaggcc
tacgtgccgtcctcggacaccttcatcgagaaggacgcctcgatcaacgaccacatcgag
cagatgcgcctgtcggcgaccaaggcgctgctcgagcgtcgcgacgccctgatcgtggtc
tcggtgtcggccatctacggcctcggcgatcccgatcagtacctgaagatgcgcctgcac
ttcaatcgcggcgagctgatcgaccagcgggccttcctgcgccgcctggcggagctgcag
tacacccgcaacgacctggacttcaagcgcggcacctaccgggtgcgcggcgacgtgatc
gacatctttccggccgacgccgaggacgaggcggtgcgagtggagctgttcgacgacgag
atcgacggcatcagcctgttcgacccgctgaccggcgaggtgcgcggcaaggtaccgcgc
atgacgatctacccgaagtcgcactacgtcacgccccgcgagaccatcatgggcgccatc
gatcgcatcaaggaggaactcgccgagcggctggccttcatgcgccagcacgacaagctg
gtggaggcccagcgcctcgagcagcgcacgctctatgacatcgagatgatgctcgagctc
ggctactgcaacggcatcgagaactactcgcgctacctctcgggccgcgagccgggccag
gcgccgccgactttcttcgactacctgcccagcgacgcgctgctgttcatcgacgagtcc
cacgtcagcgttccccaggtggggggcatgtacaagggtgaccgttcgcgcaaggagacg
ctggtcgagtacggcttccggctgccctcggcgctggacaaccggccgatgaaattcgag
gagtgggagcggatcagcccgcagacggtcttcgtctcggccacgcccggcccctacgag
gccgagcacgccggccaggtggtcgagcaggtggtacgccccaccgggctgctcgacccc
gagctagaggtgcggcctgcctccacccaggtcgacgacctgctgtcggagatccgcgag
cgcaccgcggtggaggagcgcgtgctggtcaccaccctgaccaagcgcatggccgaggac
ctcaccgagtacctcgacgagcacgacgtgcgggtgcgctaccttcactccgatatcgac
accgtggagcgggtcgagatcatccgtgacctgcgcctcggcaagttcgacgtgctggtc
ggcatcaacctgttgcgcgagggcctcgatatcccggaggtgtcgctggtggccatcctc
gacgccgacaaggaaggcttcctgcgcaacgagcgctcgctgatccagaccatcggccgg
gcggcgcgcaacgcccacggcaaggcggtgctctacgccgaccgcatcaccgactccatg
cgccgcgccatggacgagaccgagcgtcgccgggccaagcagatcgcccacaacgaggaa
cacggcatcgtgccggagacggtgcatcgctcggtggccgacatcctcgaggccgccgag
gccccggggcgcaagggcaagggccgcaagagcgagcgcaaggtggccgagggttcggcg
gtctacgatccgaacgacctgggcccggccgagctggcgaaggagatcacccggctggag
gacgccatgtccgaggccgcgcagaacctcgagttcgaggaggccgcgcggctgcgcgac
cggctgctggagttgaaggagcgtcagctcgcggtcggctag

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