Halomonas halophila: QWG60_14410
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Entry
QWG60_14410 CDS
T09170
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hhao
Halomonas halophila
Pathway
hhao03030
DNA replication
hhao03430
Mismatch repair
hhao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QWG60_14410 (dnaE)
03430 Mismatch repair
QWG60_14410 (dnaE)
03440 Homologous recombination
QWG60_14410 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhao03032
]
QWG60_14410 (dnaE)
03400 DNA repair and recombination proteins [BR:
hhao03400
]
QWG60_14410 (dnaE)
Enzymes [BR:
hhao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QWG60_14410 (dnaE)
DNA replication proteins [BR:
hhao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QWG60_14410 (dnaE)
DNA repair and recombination proteins [BR:
hhao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QWG60_14410 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WJY06872
LinkDB
All DBs
Position
complement(3069051..3072560)
Genome browser
AA seq
1169 aa
AA seq
DB search
MTAPFVHLRVHSEFSLVDGLVRLKPLIKAAGNQGVPALALTDEANLFALVKFYGGAQGAG
LKPIIGGDFWLANPNDEAHPYRLTLLAMNDVGYRNLTELISRGWVEGQKDGVALLQRGWV
LEQSEGLIALSGGREGDVGRHLLTDHHAEARALLDEWQAAFPGRYYLELTRTGRPLEEEC
VHLSVDLAVETGTPVVATNDVRFLEREDFWAHETRVSIGEGKALDDPRRERRYTEEQYFK
SPEEMAELFSDIPEALENSVMIAARCNVDVRLGEIFLPEYGIPEGMTQEEFFRKISHDGL
TERLDFLYPVDKYPRDGDEYAEIDARYRKRLDFELDIILQMGFPGYFLIVMDFIQWAKDN
DVPVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IDYVAERYGRDAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLAKA
IEDEPQLKEFLDADEEAQEIWDMAVKLEGITRGTGKHAGGVVIAPTKLTDFSPLICDEDG
SGLRVQYDKNDIEDAGLVKFDFLGLRTLTIIDWALEMVDKVRAAEGQGPLNIDAIPLDDK
PTFEMLKKAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAEVAYPHPDYQHELLKPVLEPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGK
KKPEEMAKQRAGFMEGCAENGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHIGLTVTPPDVNVGGYKFTVDDEGRVVYG
LGAIRGVGEGPIGAIVEAREEGGAFRDLFDFCKRVDPKRMNKRTLEALIRSGALDNLGPS
RAVMAASLEAALKAAAQNQANQNLGMMDMFGEAFAASDEEDDTDVYADYRGARDWTDKER
LGGEKDTLGLYLTGHPIDEYEKELERFVSTRIGDLKPSRESQRVAGLVVGMRTMKSKRGD
TMAFVTLDDRTGRIEASLFGELFDQVRNRLDTDQVLIVEGEVQSDDYSGGLRLRGKEITP
MVDARTRYGQAVELALDGERANGRLVDSLRDSLAPYRSGEGLPVRLRYRSATASGWLELA
EEWRVTPSDELLIALREVEGQDGVRLRYR
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcccttcgttcatctccgtgtgcacagcgaattctctctggtcgatggcctg
gtgcgtctcaagccgctgatcaaggcggcgggcaaccagggcgtgccggcactggcgctc
accgacgaggccaacctcttcgccctggtcaagttctacggcggcgcccagggggccggc
ctcaagccgatcatcggtggcgacttctggctcgccaaccccaacgacgaggcccatccc
taccgcctgacgctgctggccatgaacgacgtcggctatcgcaacctcaccgagctgatc
tcgcggggctgggtcgaagggcagaaggacggcgtggcgctgcttcagcggggctgggtg
ctcgagcagagcgaggggctgatcgccctgtccggcggccgcgagggcgacgtcggccgt
cacctgctgaccgaccaccacgccgaggcccgggccctgctcgacgaatggcaggccgcc
ttccccggacgctactacctggagctgacccgcaccggccggccgctggaggaggagtgc
gtgcacctctcggtggatctggccgttgagaccggcaccccggtggtggccaccaacgac
gtgcgcttcctcgagcgcgaggacttctgggcccatgagacccgggtctcgatcggcgag
ggcaaggcgctggacgatccgcgccgcgagcgtcgctataccgaggagcagtacttcaag
agccccgaggagatggccgagctgttctcggacattcccgaggcgctggaaaacagcgtg
atgatcgccgcgcgctgcaacgtcgacgtgcgcctgggcgagatcttcctgccggaatac
ggcatccccgagggcatgacccaggaggagttcttccgcaagatctcccacgacggcctg
accgagcgcctggacttcctctacccggtggacaagtatccccgtgacggcgacgagtac
gccgagatcgatgcccgctaccgcaagcggctcgacttcgagctcgacatcatcctgcag
atgggcttcccgggctacttcctgatcgtgatggacttcatccagtgggccaaggacaac
gacgtccccgtcggcccggggcggggctccggtgccggctcgctggtggcctatgcgcag
aagatcaccgatctggatccgctcgaatacgacctgctgttcgagcgtttcctgaacccc
gagcgtgtctcgatgcccgacttcgacgtcgacttctgcatggagaagcgcgaccgggtg
atcgactacgtggccgagcgctacggtcgcgacgccgtctcgcagatcgtcaccttcggc
accatggccgccaaggccgtcgtgcgcgacgtggcccgcgcccagggcaagccctactcg
ctgggcgacaagctgtccaagctgatccccttcgaggtcggcatgaccctggccaaggcc
atcgaggacgagccccagctcaaggagttcctcgacgccgacgaggaggcccaggagatc
tgggacatggcggtgaagctcgagggcatcacccggggcaccggcaagcacgccggcggc
gtggtgatcgcgccgaccaagctcaccgacttctcgccgttgatctgcgacgaggacggc
agcggcctgcgcgtgcagtacgacaagaacgacatcgaggacgccgggctggtcaagttc
gacttcctgggcctgcgcaccctgaccatcatcgactgggcgctggagatggtcgacaag
gtgcgcgccgcggaagggcaggggccgctgaacatcgacgccatcccgctggacgacaag
ccgaccttcgagatgctcaagaaggccgagaccacggcggtgttccagctcgaatcccgc
ggcatgaaggagctgatcaagcgcctgctgccggactcgctggaggacatgatcgccctg
gtggcgctgttccgtccggggcccttgcagtcgggcatggtcgacgacttcatcaaccgc
aagcacggccgggccgaggtcgcctatccgcacccggactaccagcacgagctgctcaag
ccggtgctcgagcccacctacggcatcatcctgtaccaggagcaggtgatgcagatcgcc
caggtgatggccggctacagcctgggccaggccgacatgctgcgccgtgccatgggcaag
aagaagcccgaagagatggccaagcagcgcgccggcttcatggagggctgcgccgagaac
ggcatcgacaaggacctggcgggcaacatcttcgacctggtggagaagttcgccggctac
ggcttcaacaagtctcactcggcggcctacggcctggtgtcctaccagaccgcctggctc
aaggcgcattatcccgggcccttcatggcggcggtgatgtccaccgagatggacaacctc
gacaaggtggtgccgctgatcgaggagtgccgccatatcgggctcacggtgacgccgccg
gacgtcaacgtcggcggctacaagttcaccgtcgatgacgagggccgggtggtctatggc
ctgggcgccatccgcggcgtcggcgagggccccatcggcgccatcgtcgaggcccgggag
gagggcggcgccttccgcgacctgttcgacttctgcaagcgggtcgaccccaagcgcatg
aacaagcgcaccctggaggcgctgatccgctccggggcactggacaacctgggcccgagc
cgcgcggtgatggccgcctcactggaggccgcgctcaaggctgcggcccagaaccaggcc
aaccagaacctgggcatgatggacatgttcggcgaggcctttgccgcctccgatgaagag
gacgacaccgacgtctacgccgactatcgcggtgcccgcgactggaccgacaaggagcgc
ctgggcggcgagaaggatactctcgggctgtatctgaccggtcatcccatcgacgagtac
gagaaggagctcgagcgcttcgtctccacccgcatcggcgacctcaagccgtccagggag
tcgcagcgggtcgccgggctggtggtcggcatgcgcaccatgaagtccaagcgcggcgac
accatggccttcgtcaccctggacgaccgcaccggccgcatcgaggcctcgctgttcggc
gagctgttcgatcaggtgcgcaaccgcctggacaccgaccaggtgctgatcgtcgaaggc
gaggtgcagagcgacgactattcgggcggcctgcgcctgcgtggcaaggagatcacgccg
atggtcgacgcccgcacccgctacggccaggcggtggagctggcgctggacggcgaacgc
gccaacggccggctggtggacagcctgcgcgacagcctggctccctaccgcagcggcgag
ggcctgccggtgcggctgcgctaccgcagcgccacggccagcggctggctggagctggcc
gaggagtggcgggtcacgccctccgacgagctgctgatcgccctgcgcgaggtcgagggc
caggacggcgtgcgcctgcgctaccgttga
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integrated database retrieval system
