Harpia harpyja (harpy eagle): 128135121
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Entry
128135121 CDS
T10541
Symbol
RGPD4
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 4 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03013
Nucleocytoplasmic transport
hhar03250
Viral life cycle - HIV-1
Brite
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128135121 (RGPD4)
Chaperones and folding catalysts [BR:
hhar03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
128135121 (RGPD4)
Ubiquitin system [BR:
hhar04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128135121 (RGPD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
IR1-M
Pro_isomerase
WH1
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_14
ARM_TT21_C
ANC1_spectrin
TPR_8
TPR_16
Motif
Other DBs
NCBI-GeneID:
128135121
NCBI-ProteinID:
XP_052629640
LinkDB
All DBs
Position
22:18363219..18397571
Genome browser
AA seq
3140 aa
AA seq
DB search
MMRRTKPEVERYVASVQAAAPSSREKSMKGFLFAKLYFEIKEYELAKRYISTYLNVQERD
PKAHRFLGQIYEAEDNIEKAFGCYKRSVELNPTQKDLVLKIAELLCNNDITDGRAKYWVE
RAAKLFPGSPAVYRLKEQLLDCKGEDGWNQLFDLIQAELYARPDDVYINIRLVALYRSNN
RLRDAVLHCQEAEKKIPLQSSLEWCSCVVETFEEYLESLQDLESDKNNWRAIKKDHLLAY
SSFVKMTLSSRDVQECREALESFDRVLQSVKPYVNGPDELSRTFVEMKGQLYMHAGTLLL
KMAQHNEAQWRVVCELAALCYLISFQVPKPKSKLIKGDQAGQDVLEMLACDRKSQSGHML
LNLSHGKQDFFKEIVESFANKSGSFTLFDSLFESGASKERSFIGTDDIGNVNTQAPVQVE
LNKYDIGAVRMHSGSLQHLVWLGLQWNSMSVLPPMRKWLKQLFHLPQETSRLETDAPESI
CLLDLEVFLLGVVFTSNLQLQEKFNSHYGAHQPQFLPLPVCKQLYTEKQRSWWDAVRTLI
QRKTTPGTAAKLRLIVQHGISTLRTLEKHGLQPALIIHWAKSLQKTGISLNSFYDQKEYI
GRSVYYWKKVLPMLETIKKKRSIPEPTDPLFKHFHSVDIQVFQVAAYEEEARIAFAMLDA
VDGKTDDALLAFEAIKNVVSYWNLAVIFQRKAEEIENDAMLPEEQEEHKTYLLKSKHYLM
KIIEESSSDMSVTEKLPVSIETVREMLDTVIQELGENGEEGSPAFRNGLSRAVDSEMKHS
TPSPTKFSLSPTKSYKFSPKTPPQWAEDHRSILQMICQQVEALKNEMQEMKLNNSNSNAS
SHRWPAESYGTDTMSEGYQRAQNLHEAPLTVATTGPSVYYSQSPAYNSQYLLRTAATNVT
PTKAPVYGMNRLTPQQHIYAYQQPMHTPPLQNTSACMFSQEIYGTPLRFDSPATGLISPR
GGDDYYNYGVPQASTNPPLPEPGYFTKPSVAPPALKPAESKVIEFPKSKFGQPGTAEGSK
TSLPTPAQSSQPTTFKFNTNFKSNDGDFTFSSLQATTQPANAAFNSSESLLGLLTSDRPL
QDDRHIEQKPVNDHTNSQRNIFNFGNKHIPGISFRESMGQNAHKTLGFEKSDMFSVQEPS
KLVFMTSNSDLANRSHEGHEGGSTHGGDEDDDGPHFDPVVPLPDKIEVKTGEEDEEEFFC
NRAKLFRFDAESKEWKERGIGNVKILKHKVSGKFRLLMRRDQVLKICANHYINTDMKLTP
NAGSDKSFVWHALDYADELPKPEQLAIRFKTPEEAMLFKSKFEESQNILKTLGSNVDTSV
TQSSGTARETTNQDIKEPSRSISGTLNFGFQFPKDGVSSESDSKGSLTATSTASGPTTFS
FGKEAPQTYSSGGFGQHLVKKDQWECKVCLVPNEAAAKNCVSCQSPNPDMWETHGTPLTD
SAGSFKASGSTVQDKFGSAFAKKEGQWDCSVCLVRNEPTASKCVACQNPNKTNTAVSGQQ
TTSKFGQAIAPKAIQNDLGTAFSKKEGQWDCSVCLVRNEPTASKCVACQNPNKTNTAVSG
QQTTSKFGQAVAPKAIQNDLGTAFSKKEGQWDCSVCLVQNEAKDVNCHSCQNPNSQSQPN
VPIPNVQASPAPRFGSIADASKPQKNGFEGLFTKKEGQWDCSTCLVRNEGSSPACAACQT
PNPSGKPAGDASSTPTFGLKSKLSEPAGGQLGTGFKCDFLEKGFKFGHGEQGKTPSFTFQ
IPSDTEAKSAKEGFSFAMPVPADGFKFGIQESSKNTTKKDEPSKECTTGFLKSTDEKDKK
EPPSDSGITFQFQESANKEKGDFVFGQNSSTFTFAELAKSTPGEGFQFGKKDPNFKGFSG
AGEKLFSSQDSKPDHKSNTSADLGEKDDDVYKTEDSDDIHFEPIVQMPEKVEPFTGEEDE
KVLYSQRVKLFRFDPETSQWKERGVGNLKILKNEVNGKVRILMRREQVLKVCANHWITTT
MNLKQLSGSDKAWMWMANDYSDGDAKLEHLAAKFKTPEQAEEFKQKFEECQRLLLDIPLQ
TPHKLVDTGRTAQLIQKAEEMKCGLKDLKTFLTDDKTKLSEEENGNSVCASSTSDLVIKP
HAESTGPTLEWDNYDLREEALDDSVSSSVYASPLASSPVRKNLFRFGESTTGFSFSFKSA
LSPSKSPAKQNQSRTSVGTDEDSDVTQEEERDGQYFEPVVPLPDLVEVTSGEENEQVVFS
HRAKLYRYDKDANQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMNMQQ
MKGSDRAWVWTACDFADGERKVELLAVRFKLQDVADSFKQIFDEAKHAQERETLITPLSS
RANTPKESPCGKNAVAVLEETTRERTDLSHGDNTSDVTVEVTEVSNTSETPTKTVVSPPK
FVFGSESVKSIFSNEKSKTFTFGNTSATGSLFGFSFNPPRKSEDHIPMSQNTAQKELEVS
EPPKSSSAPQKPPDSKVDNLPTSTQDGPSNFSFRILEKGFNFSLFKSNPMAFWTSTSSLQ
PDSKAEKTTVAEGDLPSDEVVIVYELTPTPEQRALAGFLKLPSTFFCYKNKPGYVSDEDD
DEDYETAVKKLNGRLYPSDSEEKKKLQEPVKVGIAGKSEFNNERECATTWEKKPTPEEKA
KAETLQVPSTSVCGVSSDTEDDSPEDFQTEVKIQETKSQENEVTSSADLVCTSKEEVPTP
STGEVTVSVQSVTNSEEPDSTTETVHVSQTLSGADDKPVDLSTKKSDSDCPESTQENRII
SFGFGSTAGLSFADLASKNSGDFAFGSKDKNFKWANTGAAVFGETARKADEDEGGSDDEV
VHSDDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDATQWKERGVGEIKILFHT
QKKYYRVLMRRDQVLKVCANHVITKEMNLVPSDTSNNALIWTATDYADGEVKVEQLAVRF
KSQEMANSFKRRFEECQLSLSELQKGHLSLAAGLSKDTNPVVYFEVSADDEPLGHITMEL
FSNIVPRTAENFRALCTGEKGFGFKNSRFHRIVTDFVCQGGDITNDDGTGGRSIYGTAFE
DENFEVKHTGPGLLSMANKGRDTNNSQFFITLKKAEHLDFKHVVFGFVKDGMDVVKKIES
FGSPKGLVNGRIVITDCGQI
NT seq
9423 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcgcacgaagcccgaagtggagcggtacgtcgcctccgtgcaggccgccgcg
ccttcctccagagagaaatcgatgaaaggattcctctttgctaagctttattttgaaata
aaagaatatgaactggctaaaaggtatatatctacatacctcaacgtacaagagagagat
cccaaagcacacagatttcttggacaaatttatgaagctgaggataacatagaaaaagct
tttgggtgttacaagcgttctgtggaattgaacccaacacagaaagaccttgtattgaag
attgcagagttactatgcaataatgacattacggatggaagagcaaaatactgggttgag
agagctgctaagctctttcctgggagtcccgctgtttacaggttgaaggagcagttactg
gattgtaaaggtgaagatggatggaatcagctttttgacttgattcaagcagaactttat
gcaagacccgatgatgtctacataaacatcagactagttgcactctaccgttcaaataac
agattaagagatgctgtgctccattgtcaggaagcagagaagaaaatacctttgcagtca
agcctggaatggtgttcctgtgttgtagagacatttgaggaatatctggaatctttacaa
gacttggagtctgataaaaataactggagagctatcaagaaagatcatctgctggcctat
tctagctttgtcaaaatgacactttcttctagagatgttcaggaatgcagagaggcactt
gaaagttttgatcgtgtgcttcagtcagtgaaaccatatgtgaatgggccggatgagttg
tctcgtacctttgtggaaatgaaaggacagctgtacatgcatgctggaactttgctactg
aaaatggcccaacacaatgaggcacagtggagagttgtgtgtgaactagcagcattgtgt
tatctgataagtttccaggttcctaaaccaaagtcaaaactaataaagggggatcaagct
ggacaagatgtgcttgaaatgttggcctgtgatcgaaaaagccagtctggtcatatgctg
ctgaacttaagccatggcaagcaagatttctttaaagagattgtggaatcatttgcaaac
aagagtggttcgtttacattgtttgatagcctgtttgagagtggagcttctaaagagaga
tcttttattggcacagatgatattggaaatgtcaatacacaagcaccagtgcaagtggaa
cttaataaatatgatattggtgctgttcgaatgcacagtggcagtctccagcacctcgtg
tggcttggcttgcagtggaactctatgtcagtcttacccccaatgcgcaaatggttaaaa
cagctttttcacttgccccaagaaacatcaagacttgagacagatgctcctgaatccatt
tgcctattggaccttgaagtattcctacttggggtggtattcactagcaacttacaattg
caagagaagtttaattctcactacggtgcacatcagcctcaattcttaccactgccagtg
tgcaaacagctctataccgaaaagcaaagatcctggtgggatgccgttcgtactcttatt
cagagaaaaacaacaccaggaacagcagcaaaactgaggcttatcgtgcagcatggaata
agtactctgcgaacactggagaaacatggccttcaacctgccttaattatacactgggca
aaaagcctgcaaaaaacaggcattagccttaactctttctatgaccagaaggaatacatt
ggacgaagtgtctattactggaagaaagttttgcctatgctggaaactatcaaaaagaag
aggagtattcctgaacctactgatcctctcttcaaacacttccatagtgtagacattcag
gtgtttcaggttgcagcgtatgaagaagaggcacgtatagcatttgcaatgttggatgca
gttgatggcaaaactgatgatgctttattagcatttgaagctattaagaatgtggtttca
tactggaatcttgccgtgatcttccaaagaaaggctgaagagattgaaaatgatgccatg
ctgccagaagaacaagaagaacacaaaacctatcttcttaaaagcaagcattatttaatg
aaaatcattgaggaaagctcctcagatatgtcagtaactgagaaactgccggtgtctatt
gaaactgtgagggaaatgctagatacagtgatccaggaacttggtgagaatggtgaagag
ggaagtcctgccttcagaaatggcctgtcacgagctgtagattcggagatgaaacattcc
actccatcaccaactaagttctctctttcaccaactaagagctacaagttttctccgaaa
actcctcctcagtgggcagaagatcacagatctatacttcagatgatctgtcagcaagtg
gaagctttaaagaatgaaatgcaagaaatgaaacttaataattccaactcaaatgcgtcg
tctcatcggtggcctgctgaaagctatggaacagatacgatgtcagagggctatcagaga
gcacaaaatcttcatgaggctccattaacagttgctaccactggcccatctgtttactac
agccagtcccctgcctataactctcagtatcttctcagaactgctgcgaccaatgtaaca
ccaacgaaggctcctgtctatggcatgaaccgacttacacctcagcaacatatatatgct
tatcaacaaccaatgcatacaccacctctgcaaaacacttctgcttgtatgttttcccaa
gaaatatatggcacacctctgcgttttgattctcctgctactggactcatttcccctcgt
gggggtgatgattattacaattatggtgttccacaggcaagcacaaatccaccattgcct
gaaccaggctatttcacaaagccttcagtcgcgccaccagctttaaagcctgcagaatca
aaagtgatagagtttccaaaatctaaatttggacagccaggaacagcagaaggatcaaaa
acatctctgccaacaccagcacagtcgagtcagccaacaacttttaaattcaacactaac
ttcaagtctaatgatggagactttaccttttcttctcttcaagctacaacgcagcctgct
aatgcagcttttaatagcagcgaaagccttttgggtcttctgacatctgatagaccttta
caggatgatagacatatcgaacaaaaaccagttaatgatcacacaaatagtcaaagaaac
atcttcaattttggcaataaacatattccaggcatctcttttagagaaagcatgggacaa
aatgcgcacaaaaccctgggttttgagaagagcgatatgtttagtgtccaagaaccaagc
aagcttgtatttatgacttcaaattcagatttggccaatagaagtcatgaaggtcatgag
ggaggaagcacccatggtggagacgaggatgatgatggtcctcattttgatcctgtggta
ccactccctgacaagattgaagtaaagacaggtgaggaagatgaagaagaattcttctgc
aacagagccaagctctttcgttttgatgcagaatctaaagaatggaaagaaaggggtatt
ggaaatgtgaaaatactgaaacataaagtgtctggcaaatttcgtcttctaatgagacgg
gaccaagtactgaaaatctgtgcaaatcactacataaataccgatatgaaattaactccc
aatgctggatcagataagtcatttgtatggcatgctttagattatgcagatgagttgcca
aaaccagaacagcttgcaattagatttaaaacacctgaggaagcaatgcttttcaaaagt
aagttcgaggagtcacagaatattttaaaaaccttgggatcaaatgttgacacatctgtg
actcagagtagtgggactgcaagagaaacaacaaatcaggacatcaaggagcctagcaga
tccatttctgggaccctgaactttggctttcagttcccaaaagatggggtgagcagtgaa
tctgatagcaaaggcagtcttacagctacatcaactgcgtctggccctaccactttttca
tttggaaaggaagccccgcaaacctattcttctggtgggtttgggcagcatctcgtgaag
aaggatcaatgggagtgtaaagtatgtttagttccaaatgaagcagctgcaaagaattgt
gtgtcatgtcaaagtccaaatccagatatgtgggaaacacatggcaccccattaactgac
tctgctggaagtttcaaagccagtggtagtactgtgcaggacaaatttggatctgctttt
gctaaaaaggaaggtcaatgggattgcagtgtctgtttagtaagaaacgaacccactgcc
tccaagtgtgttgcgtgccagaatccaaacaaaactaatacagcagtatctggtcaacaa
actacttctaaatttggccaagcaattgctccaaaggctattcaaaatgacttgggaact
gcattttctaaaaaagaaggtcagtgggactgctctgtctgtttagtaagaaacgaaccc
actgcctccaagtgtgttgcgtgccagaatccaaacaaaactaatacagcagtatctggt
caacaaactacttctaaatttggccaagcagttgctccaaaggctattcaaaatgacttg
ggaactgcattttctaaaaaagaaggtcagtgggactgctctgtatgcctagtccaaaat
gaagcaaaagatgtgaactgtcattcttgtcagaatcctaactctcaaagtcaaccaaat
gtgcctatacctaatgttcaggcatcccctgctcccaggtttggttccattgctgatgca
agtaagccacagaaaaatggatttgaagggctttttactaaaaaggaagggcagtgggat
tgtagtacttgtcttgtgaggaatgaaggttcttcaccagcctgtgcagcctgccaaacg
ccaaatccatctggtaagcctgctggtgatgcttcatcaactcctacttttggcttgaaa
agtaagttatccgaacctgctggaggacagttgggaacaggcttcaagtgtgatttctta
gaaaagggctttaagtttggtcatggtgagcaaggcaagacaccatcatttacgtttcag
attccttctgatactgaagctaagtctgcaaaggaaggatttagctttgcgatgccagtg
cctgcagatggatttaaatttgggatacaggagtctagtaaaaataccactaagaaagat
gagccatccaaagaatgtacaactggcttcttgaaaagcactgatgaaaaagacaaaaag
gaaccgccttcagatagtggaattacgttccaatttcaagaatcggcaaacaaggagaaa
ggcgactttgtttttgggcaaaatagcagcacttttacttttgccgagcttgcaaaaagt
actcctggggaaggctttcagtttggcaaaaaagaccctaacttcaaaggcttttcaggt
gcaggtgaaaaactgttttcttcacaggattctaaaccagatcacaaatcaaatacatct
gctgaccttggtgagaaggatgatgatgtgtataagacagaggacagtgatgatatccat
tttgaacctatagttcagatgcctgaaaaagtagaaccatttacaggagaggaagatgag
aaagtgttatactcccaaagagtaaagctgttcaggtttgatccagaaacaagccagtgg
aaagaacgtggggtgggtaacctgaagattcttaaaaatgaagttaatggcaaagtaaga
atattaatgcggcgtgagcaggtactgaaggtgtgtgcaaatcactggataacaacaaca
atgaacttgaaacagctgtctggctcagacaaagcatggatgtggatggccaatgactac
tctgatggtgacgctaagttggaacatctggcagcaaaattcaagacgccagagcaggct
gaggagttcaaacagaagtttgaagaatgtcagaggctactactagatataccgctgcag
acaccccataaacttgttgatacaggtaggacagctcaacttatacagaaagcagaagaa
atgaagtgtggcttaaaagatctcaaaacgtttctgacagatgacaaaactaaactgtca
gaagaggaaaatggaaactctgtttgtgccagcagtacttctgatctggttataaagccg
cacgctgaaagtactgggcctactctggaatgggataactatgatttgcgtgaagaagca
ttggatgatagtgtaagtagttctgtgtatgcatcacctcttgcaagtagccctgtaagg
aaaaatctgtttagatttggagagtctaccacaggttttagtttcagctttaaatctgcc
ttgagcccatccaaatctcctgccaaacagaaccagagtagaacatcagtaggcacagat
gaagattctgatgttactcaggaagaggagagagatgggcagtactttgaacctgtggta
cctctgcctgatcttgtggaagtgaccagtggtgaggaaaatgagcaagttgtcttcagt
cacagagctaagctctacagatatgacaaagatgctaatcagtggaaggagagaggtatt
ggggacatcaagatattacagaactatgacaacaaacaagtacgtatagtaatgagaagg
gaccaggtactaaaactctgtgccaatcatcgaataacaccagacatgaatatgcaacaa
atgaaaggatccgatagagcatgggtatggactgcatgtgactttgcagatggagaaagg
aaagtagaacttctagctgtgcgattcaagctgcaagatgttgcagactcatttaagcaa
atttttgatgaagcaaagcatgcccaagagagagagacattgataacacctctttcttct
cgtgccaatacaccaaaggaatctccgtgtggtaaaaacgctgtagctgtactggaagaa
actaccagagaaagaactgaccttagccatggtgacaatacttccgatgtaactgtagag
gttacagaggtgtcaaacacttctgaaacaccaacaaaaacagtggtttctcctccaaag
tttgtatttggatctgaatctgtcaagagcattttcagtaatgaaaagtcaaagactttc
acgtttggaaatacttcagccactggttctctctttggcttcagctttaatcctccaaga
aagagtgaagaccacattccaatgtctcagaacacagcgcagaaagaactggaagtctct
gaaccaccaaaaagctctagtgctcctcagaagcctccagacagcaaggtagacaacttg
cctacttcaacacaagatggaccctccaacttctcatttagaattctggaaaaaggattt
aattttagcctttttaaatctaatccaatggccttttggacaagcacatcttccttgcaa
cctgatagtaaagctgagaagacaacggtggcagaaggtgatcttccatctgatgaagtt
gtaatagtttatgagttaacacctacccctgaacagagagctcttgctggctttctcaag
ctaccttcaaccttcttctgttacaagaataagcctggatatgtgagtgacgaggatgat
gatgaagactatgaaacagctgttaaaaaacttaatggaagactgtatcccagtgattca
gaagagaagaagaaattgcaagaacctgtaaaagtaggcatcgcaggaaaaagtgaattc
aacaatgaaagagaatgtgctactacttgggaaaagaaaccaactcctgaggagaaggct
aaagcagaaactctgcaggttccttctacatctgtctgcggtgtcagcagtgatactgag
gatgacagtccagaagactttcagacagaagttaaaattcaagaaacaaaatcccaggag
aatgaggttacaagttcggctgacttagtctgtaccagtaaggaagaagtacctactcca
tcaactggtgaggtgacagtatctgtccagtcagttaccaacagtgaagaaccagattcc
accacggagactgtgcatgtatcacagactttatcaggagctgatgacaaacctgtagac
ttgtcaactaaaaaaagtgattcagactgtccagagtcaacacaagaaaacagaatcatc
tcatttggtttcggcagtactgcaggcttgtcatttgcagatctggcttccaaaaactct
ggagactttgcttttggctcaaaagataaaaacttcaaatgggcgaatacaggagcagct
gtgtttggggagacagcccgtaaagcagatgaagatgaaggtggtagtgatgatgaggtg
gtacatagcgacgatatccactttgagccaattgtgtctttaccagaggtggaggtaaaa
tctggagaagaagatgaagaaattctcttcaaagagagggcaaaactttacagatgggac
agggatgctactcagtggaaggagcgtggtgttggagagataaagatcctcttccataca
cagaagaaatactatagagtcctaatgagaagagaccaagttcttaaagtttgtgcaaac
catgtcatcaccaaagaaatgaacttagtgccctctgatacgtcaaacaatgctttaatt
tggacagccacagattatgccgatggtgaagtaaaggtagaacaacttgcagtcagattt
aaaagccaagaaatggctaattctttcaagaggaggtttgaagaatgccagctaagtttg
tcagaactacagaaaggacacttatctctggcagcaggactgtcaaaggacaccaaccct
gttgtgtattttgaagtttctgctgatgatgaacctttaggacacataaccatggagctg
ttttcaaatattgtccctcgaactgctgaaaatttcagggccctgtgcacaggagagaaa
ggatttggattcaagaactccaggtttcacagaatagtcactgactttgtgtgtcaggga
ggtgatataactaacgatgatggaacaggtggacggtcgatttatggaacagcatttgaa
gacgagaattttgaagtgaaacacaccggtcctggattgttgtcaatggcaaataagggc
agggatacgaataattctcagttcttcataactcttaaaaaagcagaacatttggacttc
aagcatgtggtatttgggtttgtgaaagatggaatggatgttgtgaaaaagattgaatcc
tttggttctcctaaaggtctagtaaatggaagaattgtcattacagactgtgggcaaata
tag
DBGET
integrated database retrieval system
