Harpia harpyja (harpy eagle): 128135818
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Entry
128135818 CDS
T10541
Symbol
SKIC2
Name
(RefSeq) LOW QUALITY PROTEIN: SKI2 subunit of superkiller complex protein
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03018
RNA degradation
Brite
Enzymes [BR:
hhar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128135818 (SKIC2)
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128135818 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
128135818 (SKIC2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128135818
NCBI-ProteinID:
XP_052630847
LinkDB
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Position
25:complement(36993..49010)
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AA seq
1244 aa
AA seq
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MELERIALPPRGPLELPLALLELGCAGRFELLTGPPGPGEAPPPRSTLPQGLPPFAPPPV
SELEQRFLGTPEWLPPHQHERARRYWGGMSRGGGSGRQSPGPLFALEPTPVAGGLRAERD
PHSGALRGFTEELLSDVGLSAKNSLSLRRPPGPPGQSLRGNATNFPFWPGKAPPLYLWGG
SFAGGGGAMWIHGAEPPRMRGPPISRPTQRRGWGGRCPSPASWRPSTCSTWGGDEAEGGS
GDSRPPAGGSPPPPLRHADSLEEVLLKEAVEPPAPPPEPPEEQWAIPIDASTPVEDFDQR
IPDPAFKWPFVPDPFQQQAVLCLERGHSLLVAAHTSAGKTAVAEYAIALAQRHMTRTIYT
SPIKALSNQKFRDFKTTFGDVGLLTGDVQLRPEASCLIMTTEILRSMLYNGSDVIRELEW
VIFDEVHYINDAERGVVWEEVLIMLPEHVKLILLSATIPNALEFAQWVGRTKRRRLRVIS
TRQRPVPLEHFLYTGNSSRTRHQLFLLLDARGNFSTQGYYAAVEAKKERTSKHAQTFGAK
QPTMGGTGPGQDRGVWLALLGLLREREQLPVVAFTFSRSRCDEHADALGSLDLVSSAEKG
RIRLFFQRCIARLRGSDRRLPQVLRMAELLQRGIGVHHGGVLPLLKEVVEMLFSQGLVKV
LFATETFAMGVNMPARTVVFDSIRKHDGNNFRDLLPGEYVQMSGRAGRRGLDSTGTVIIL
CKGPVPEMADLHRVMLGRPTRLQSQFRLTYSMILNLLRAQALRVEDMMRRSFSEFPLRRD
APAQERRVAELQRELAALGEPEAEGAMADLPPYHRAVQGLRQARGSRQRRLAESVAGLRA
LAPGRVVVVCTPKHRNALGLILQVSSEGSSRTFTTLVLCEKPPEEGGRRWTPPKPDVPYP
EDLLLTRLFVPEGACGHVLEKLQPGDIGGVTAKTLRVNPERVLQELRPRQAVPPRSEPPG
MEVGAAVQELLARLAGGAPGGLPLLDPVGTLQLRDPEAVEAAARARTLAASLGSFHCVHS
PRFPQQYAQFAARQELLEQLEHLQFLLSDQSLLLLPEYHQRVAVLRALGYVAEGGAVALG
GRLASLLSTHELVLTELLLGNVLAPLXVCQGRGEAPPHMPPALQQGMEQVRAVAQRVGRL
QQECGLSQSVEEFVDQFSFSLVEVVYEWARGMPFADIARLAAVQEGAVVRCIQQLEETCR
EVRQAARLVGESALAAKMEAASNMIKRDNMIKRDIVFAASLYTQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagcggatcgcgctgcccccccgcgggcccctggagctgccgctggcgctg
ctggagctgggctgcgccgggcgcttcgagctgctgacgggacccccggggccgggggaa
gcgcccccgccgcggtccacactgccccaggggctgccccccttcgccccccccccggtg
tcggagctggagcagcggtttttggggacccccgagtggctgcccccccaccagcacgag
cgggcccgcaggtattggggggggatgtctcgcggtggtggcagcgggcgccagagcccc
gggcccctctttgcactggagcccaccccggtggccggggggctgcgggccgagcgggac
ccccacagcggcgccctgaggggcttcactgaggagctgctgtccgatgtggggctctca
gccaagaactcgctgtcgctgcgccggccccccggcccccccgggcagagcctgcggggc
aatgccaccaacttccccttctggccaggtaaagccccccccctttatctctggggaggt
agttttgccggggggggcggggccatgtggatccatggggccgagcccccgcggatgcgg
ggcccccccatctcacgccccacgcagcggcgagggtgggggggccgctgtccctctcca
gcctcttggagaccctcgacatgttcgacctgggggggggacgaggccgaggggggctca
ggggacagccggcccccggcggggggcagccccccgccccccctgcgccacgccgacagc
ctggaggaggtgctgctgaaggaggcggtggagccccctgccccccccccggagcccccc
gaggagcagtgggccatccccatcgacgccagcacccccgtggaagactttgaccagcgc
atccctgaccccgctttcaagtggcccttcgtgcccgaccccttccagcagcaggccgtg
ctctgcctggagaggggccactcgctgctggtggccgcccacacctcggccggcaaaacc
gccgtggccgagtacgccatcgccctggcccagcgccacatgacccggaccatctacacc
tcccccatcaaggcactctccaaccagaagttccgggatttcaagacgacgttcggggac
gtggggctgctgacgggggacgtgcagctgcgccccgaggcctcctgcctcatcatgacc
accgagatcctgcgatcgatgctctacaacggctccgacgtcatccgggagctggagtgg
gtcattttcgatgaggtgcattacatcaacgatgctgagcgcggcgtggtgtgggaggag
gtgctgatcatgctgcccgagcacgtcaagctcatcttgctcagtgccaccatccccaac
gccctcgagttcgcccagtgggtcggccgcaccaagcgccggcgcctgcgggtgatcagc
acgcggcagcgcccggtgccgctggagcattttctctacaccgggaacagctcccgcacc
cgccaccagctcttcctcctcctcgacgcccgcggcaacttcagcacccaggggtactac
gcggccgtggaggccaagaaggagcgaaccagcaaacacgcgcagaccttcggagccaag
cagcccaccatggggggcaccggccccgggcaggaccggggggtctggctggcgttgctg
gggctgctgcgggagcgggagcagttgccggtcgtcgccttcaccttctcccgcagccgg
tgcgacgagcacgccgacgcgctgggctccctcgacctggtctccagcgccgagaagggc
cggatccggctcttcttccagcgctgcatcgcccgcctgcgcggctccgaccgccggctg
ccgcaggtgctgcgcatggcggagctgctgcagcgcggcatcggggtgcaccacggcggg
gtgctgcccctgctcaaggaggtggtggagatgcttttcagccaggggctggtcaaggtg
ctcttcgccaccgagaccttcgccatgggtgtgaacatgccggcccgcaccgttgtcttt
gactccatccgcaaacacgacggcaacaatttccgcgatctcctgcccggggagtacgtg
cagatgtcggggcgcgcggggcggcgggggttggattccaccggcaccgtcatcatcctc
tgcaaggggcccgtccctgagatggccgacctgcaccgcgtgatgctgggccgccccacg
cgcctgcagtcccagttccgcctgacctactccatgatcctcaacctgctgcgggcgcag
gcgctgcgcgtcgaggacatgatgcggcgaagcttctccgagttccccctgcggcgcgac
gccccggcgcaggagcggcgcgtggcggagctgcagcgggagctggcggcgctgggggag
ccggaggccgagggggccatggccgacctgcccccctaccaccgggccgtgcaggggctg
cgccaggcccgggggtcccggcagcggcgcctggcagagtcggtggcggggctgcgggcg
ctggcgcccggccgggtggtggtggtctgcacccccaaacaccgcaacgccctcggcctc
atcctccaggtgtcctcagaggggtccagccgcaccttcaccacgctggtgctgtgtgag
aagccccctgaggagggggggcggcggtggacccccccaaagcccgatgtcccctacccc
gaggacctgctgctcaccaggctcttcgtgcccgagggcgcctgtggccacgtgctggag
aagctgcagcccggggacatcgggggggtcacggccaagaccctgcgggtgaaccccgag
agggtcctgcaggagctgcgcccccgccaggccgtcccccccagatcggagccccctggg
atggaggtgggggcggcggtgcaggagctgctggcccggctggcggggggggccccgggg
gggctccccctgctcgaccccgtggggaccctgcagctgcgggaccccgaggccgtggag
gcggccgcccgtgcccggaccctggccgcctcgctgggctccttccactgcgtccacagc
ccccgcttcccccagcagtacgcccagttcgccgcccgccaggagctgctggagcagctg
gagcatctccagttcctgctgtcggaccagtcgctgctgctgctgcccgagtaccaccag
cgtgtggccgtgctgcgggcgctggggtacgtggcggaggggggggcggtggcgctgggg
ggtcgcctggcctccctgctgagcacccacgagctggtgctgaccgagctgctgctgggg
aacgtcctggcccccctgnnggtctgccaggggcggggggaggcccccccccacatgccc
cctgccctccagcaggggatggagcaggtgcgggctgtggcgcagcgcgtggggcggctg
cagcaggagtgcggcctcagccagagcgtcgaggagtttgtcgaccagttcagcttcagc
ctcgtcgaggtcgtctacgagtgggcccgtggcatgcccttcgcggacatcgcccggctg
gcggcggtgcaggagggggccgtcgttcgctgcatccagcagctggaggagacgtgccgg
gaggttcgccaggccgcccggctggtgggggagtctgcgctggccgccaagatggaggcc
gcctccaacatgatcaaacgcgacaacatgatcaaacgcgacatcgtcttcgccgccagc
ctctacacccaataa
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