Harpia harpyja (harpy eagle): 128136597
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Entry
128136597 CDS
T10541
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein isoform X1
KO
K12600
superkiller protein 3
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128136597 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhar03019
]
128136597 (SKIC3)
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
128136597 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_11
TPR_16
TPR_12
TPR_17
TPR_8
TPR_CcmH_CycH
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_9
ANAPC3
ARM_TT21_C
CABIN1_N
TPR_15
TPR_6
TTC22_N
MSC6_N
BTAD
Retrotran_gag_2
MalM_C
DUF8323
TPR_30
Fis1_TPR_C
TolB_N
TPR_5
HAT_Syf1_M
TPR_20
TPR_Psidin_N
Motif
Other DBs
NCBI-GeneID:
128136597
NCBI-ProteinID:
XP_052632456
LinkDB
All DBs
Position
Z:28499000..28550855
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELDQRDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKGDLAEVYQKLLELCESGDKQKWCDVCN
KLVELYHQEKRYVEVAETWQKLIQMKQEEGAEKAELHQLWKKMIQLLKDSTQNKCNKTEQ
SLLTAFEHAVNSADTVPGEDHQNLYKDFIQCLSKFPHETARLEKACKDMMVLYPTVSYPL
EVLCLHFVQSGTLSEEALHYFSKLLEMDASSGPGIIGFGIKCLQEKKYKEAIKSLTEGLQ
KTSQCPAAWHYLAEAQMKIHKHRDAVLSCNQALEALGTPDGPSLRWKNFILQLKAEALIK
IADADAAEEAIKTLEQIMDASSDPVVLAIRGQAYLNKGLMDQASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLNAIERKAETAEYHHYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDGTDKESGTAAVDLSVQLG
DMDTALSILNEATEKASTGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPELMYSIYRAAAVEQLLGKYENAIATYQQILKKT
EDYVPALKGLGECYLMLARSALDNYLDRKAVDFIEQALEFFTRATKHRPDISCLWKLLGD
TCTSVHVISPTKVNVQVLGSLLGKNAGKQMLKKSELLRLGGRCYSRALQLMALPSIWCDL
GINYYRQAEHLTAVGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWSNLGVLYLATGNIEQAHEAFKVAQSLEPSYLLCWIGQA
LIAEAVGSYDTIDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNTELYRYNIVQMNAI
PAAQVVLNKYTERNPNDASAFTMLGYLNEYLHLKRQATDAYERAASLLKNSEDTEKYNIA
MQNYGRSLCALGQCDKAIEVYASIPLTEFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAIIEYKQNRVHAAETLLFKCSLKEPSMESLKALCTLGLVKQDATLATA
ALKELLKHEKGDDRIYERCLIASAVYALQGRNVAVQREVSKAVHRNPDNPALWSLLSRLV
PLYASQKAKGGAVAGNIAHVLDVNHGKEVLLNIAVNQLAAGCHMLEDEKNNPLKNIQKAI
RLCPDNPSAWAVLMAACHAENTVVCLNNTQPKLTDLEMILVATVSAKTGENNLPRNYIQT
VEDWCLCQAITSLEETGKLSEAEALCTKGLKSRPEHPALFLLLRQVQCKQLLQSHKELPD
NILDELRKTVMTSSTSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANVSNEHWPSLVQEATTEALKLSSCPLAALLQALLQYNRKMGARETRR
MLERVVYQPGNPETIVSVARWYLLQHLYAKDDYELIDVLKENAKANGDARALELNEKLSS
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagtgctagagacgcaatacgaaataaa
gaatataaggaggccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataattac
aatgcttgggtatttattggcctggcagctgctgagttagatcagcgtgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttagcagaggtttac
caaaagctgttggaactctgtgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aaacttgtggaactatatcatcaagaaaagagatatgtagaggtggctgaaacatggcag
aaactcatacaaatgaagcaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccagttactgaaagacagcacacagaataagtgtaataagactgaacag
tcgcttttgactgcatttgaacatgcggtgaactctgctgacactgttcctggtgaagac
caccaaaatctttacaaggactttattcagtgcttgtcaaaatttcctcatgaaacagct
aggttggaaaaggcctgtaaagatatgatggttttgtatcctactgtgagttatccttta
gaagtactttgcttgcattttgttcagtcaggtactttgtcggaagaggccctgcattat
ttttctaagcttttggagatggacgcgagtagtggtccaggcatcattggttttggtata
aaatgccttcaagaaaagaaatacaaggaggctattaagagtcttactgaaggtttgcag
aagactagccagtgtccggcagcgtggcattatttggcagaggcacagatgaaaattcac
aaacacagggacgctgtcctgtcctgcaatcaagctcttgaggctcttggaactcctgac
ggtcctagtcttcggtggaagaactttatccttcagttgaaagcagaggctttgattaaa
atagctgatgctgatgctgcagaagaagccattaaaacacttgagcagattatggatgca
agcagtgatccggtggttttagctataagaggtcaggcttatctaaacaagggtttaatg
gatcaagcttcaaagatttcacaagagctcctgttgtcccaccctgatctggctgagtcc
catgctctagagggtttcatccattattcccaaaagaactatgaacaggcagaaagaagt
tttctaaatgctattgaaagaaaggccgaaactgcagagtatcatcattacctggggctt
acatactggttcatgagtgatgagacaaaaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaactggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatggaaccgataaagagtctggaacagcagctgtagacttaagtgtgcaacttgga
gacatggacactgctctgtcaatcctgaatgaggcaactgaaaaagcgagtactggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgagcagaggtagctattcaacagctctaaaatccttcagg
aaagcaagtgagctgaacccagagctcatgtacagcatttacagagctgcagcagttgag
cagcttctaggcaaatatgaaaatgctatagctacctatcaacaaatcttaaagaagaca
gaagattatgtgcctgcactgaaaggacttggtgagtgctatctcatgctggcaagatca
gcccttgataactatcttgataggaaggctgtggatttcatagagcaggctcttgaattt
tttacaagggcaacaaagcatcgtcctgatatatcttgcctctggaaactgctcggagat
acctgtactagcgtgcatgttatttcaccaaccaaagtgaatgttcaagttctaggatcc
cttctgggtaaaaatgcaggcaaacagatgctgaagaagagcgagctgctcagactggga
ggaaggtgttacagcagagctttacaattgatggctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcggtgggcactgacatgaatgaa
atcagtgaactgctagagaagtctttacagtgtcttaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcgcttggtgtagttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggtccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggagccttcttacttactgtgttggattgggcaggct
cttattgcagaggcagtaggcagctatgatactatagatctcttcaggcacacaactgaa
ctcagtatgcataccgagggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gataaaagcaacagaaacactgaactatatcggtacaacattgttcaaatgaatgctatt
ccagcagcccaggtggtcttgaacaaatatacagaaagaaatccaaacgatgcatcagct
ttcacaatgcttggttatttgaatgagtatctgcatctaaaaaggcaggcaacagatgcc
tatgagagggcagcttcattgctgaaaaactctgaggataccgagaaatacaatatagca
atgcaaaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tatgcatcaatacccctaactgagtttgatggcattgtagggatagcattagcctacttc
aagaaaggactcttacaagaaagtatcaaagcatatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcacatatcctgactgccttggcaataatagagtataaacagaac
agagtgcatgctgcagagacactgctgtttaaatgctcattaaaggaacctagtatggaa
agtctgaaggctttgtgcacactaggactggtaaagcaggatgctacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaaggggatgataggatttatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggtagaaatgtggcggtccagagagaagtctcc
aaagcagtacataggaaccctgataatcctgccctctggtctcttctgtctcgactagtt
ccactgtatgcatcacaaaaggcaaaagggggagctgtggcaggaaacatcgcacatgta
cttgatgtaaaccatggaaaggaagtcctgctgaatattgcagttaatcagttggcagca
ggatgtcatatgttagaagatgagaaaaacaatcctctgaaaaatattcagaaggcaatc
cgcctctgtccagataatccttctgcctgggcagtgctgatggcagcgtgtcatgctgaa
aacaccgttgtctgtctaaacaacactcagccgaagctaacagatctagagatgatactt
gtagctacagtttcagccaaaactggagaaaataatcttccacgtaattatatccagact
gttgaagactggtgtctatgtcaagctattaccagtctagaggagactggtaaactctca
gaagctgaagctctttgtaccaagggtttaaaaagccgccctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggatgagcttcgcaagacagtcatgaccagttcaacttcagttgcagcctgg
caatggctggcaaaagtgtatcagtctcaaagaatgatggttggagcagagatgtgttac
agaaagagcctgcagttggcatcacagcagggcagctggaatgggaagttatccagtctg
ctcaggctagctatgctcgcactggaaatctgcatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttcatcttgccccctggca
gctctcctacaagcactgctacagtataatcgcaaaatgggagcaagggagactcgtcga
atgttggaaagagtggtttatcaaccagggaatccagaaaccatagtttcagtggcacgc
tggtacctcctgcaacatctgtatgccaaagacgattatgaattaatagatgtacttaaa
gaaaatgccaaagctaatggagatgctagagctctggaactaaatgagaaattgtcatca
agtgcctag
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integrated database retrieval system
