Harpia harpyja (harpy eagle): 128136704
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Entry
128136704 CDS
T10541
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
hhar Harpia harpyja (harpy eagle)
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhar03041
]
128136704 (YTHDC2)
Enzymes [BR:
hhar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128136704 (YTHDC2)
Spliceosome [BR:
hhar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128136704 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
R3H
Helicase_C
DEAD
AAA_19
Ank_2
HA2_N
nSTAND3
Ank
AAA_22
ATPase
Ank_4
PhoH
AAA_7
AAA_16
SRP54
Motif
Other DBs
NCBI-GeneID:
128136704
NCBI-ProteinID:
XP_052632601
LinkDB
All DBs
Position
Z:49940060..49982632
Genome browser
AA seq
1436 aa
AA seq
DB search
MSRPSSVSSRQPGEGSAAASSAAAASSAAAAAAGPAAGRGKRLKDIRVDEEVEIAVNLAL
ERFRYGEEKEMEFPSSFSSTERAFVHRLCQSLGLISKSKGKGANRYLTVRKKDGSELTQA
VMTCGLAPSTKHTVRSLIQRFPVTNKERTELLPKTERGNACAVESENRDVNKTSGRLNNG
IPQVPVKRGESEFDSVRQSLPVFEKQEEIVKIIKDNKVVLVVGETGSGKTTQIPQFLLDE
CYKNGTPCRIFCTQPRRLAAIGVAERVAAERREKVGQTVGYQIRLESRVSPKTLLTFCTN
GILLRTLMAGDSTLSTVTHIIVDEVHERDRFSDFLLIKLRDVLQNQTNLKLIISSAALDA
NLFIRYFGSCPVIHIQGRPFEVKEMFLEDILRSTGYTNKEMIKYKKEKQREEKQQSTLTE
WCSAQENNSKVESRRQRSVPSATEEYNLLDDSGDAVFNQLTEKDANCLEPWLIKEMDSCL
SDIWLHKDIDAFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLISMGASI
HCKSSNGWMALDWAKRFGQTEVVDLLESYSASVEFGNLDESSLVQTSGSDLSAEDRELLN
AYHHSFDDEKVDLDLIMHLLYNICRSCDAGAILVFLPGYDEIVSLRDRILFDDKRFADNA
HRYQVFMLHSNMQTLDQKKVLKSPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKS
FDALSCVTMLKMVWISKASAIQRRGRAGRCQPGVCFHLFSRLRFQNMLEFQTPELLRMPL
QELCLHTKLLAPINCPIVDFLMKAPDPPPALIVRNAVQMLKTIDAMDPWEDLTELGYHLT
ELPVEPHLGKMVLCAVVLKCLDPVLTIACTLAYRDPFVLPTLASQKRAAMLCRKRFTAGT
FSDHMVLLRAFQAWQKARSDGWERAFCEKNFLSQARMEIIIGMRTQLLGQLRASGFVRSR
GGADIRDVNTNSENWAVVKAALAAGMYPNLVHVDRESLVLTGPKEKKVRFHPTSVLSQPQ
YKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVSLFCGPARLPSNA
LQEPSSFRGDGVSNDNSDSEMEDKTTANLALLKLDEWLHLRLDPEAAGLLLQLRQKWHSL
FLRRMRAPSKPWSQVDEITVRAIVTVLSTEEQSAGLQQPSGIGQRPRPVTCGELPLASTW
KSTNSRKSSAETEFSDDSSNAEKVLMKSTPPTLHQPKKYKEKNILHSKRTSDDRSDQSSV
KSTDSSSYPSPCASPSPLSGKGSKSPSPRPNMPFRYFIMKSSNVQNIDISQQKGIWSTTP
SNERKLNRAFWESSTVYLIFSVQGSGHFQGFARMASEIGCEKSQDWGSSGFGGVFKVEWI
QKESIPFHFAHHLLNPWNDNKKVQISRDGQELEPQVGKQLLQLWDRIPLAAKNSTD
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcccagtagcgtctcgtcgcggcagcctggcgagggttcggccgcggcctcc
tcagccgcggccgcctcctccgccgcggccgccgccgccggccccgcggcgggccgcggc
aagaggctgaaggatatccgcgtcgacgaggaggtggagatcgcggtgaacctcgccctg
gagcggttccgctacggagaggagaaagaaatggagtttccttcctctttcagtagcacc
gaaagagcattcgttcaccggctctgtcagtctctcggactgatatctaaaagtaaaggg
aaaggagcaaatcgatacctgactgtaaggaagaaggatggatcagaactaacacaggca
gtaatgacttgcggcttggctcccagtacgaaacatactgttcggagtttaattcagaga
tttcctgtcacaaataaagaacgaacagaacttctgccaaagacagagcgaggaaatgca
tgtgctgttgaatctgaaaacagagacgtgaacaagacaagtggacggcttaacaatggt
atcccccaggttccagtgaaaagaggggaatcggagtttgattccgtcaggcaatcccta
ccagtttttgagaaacaggaagaaattgtcaaaataataaaggacaataaagttgttttg
gttgtaggagagactggatcaggaaaaactactcaaatccctcagttccttcttgacgaa
tgttacaaaaacggaactccgtgtcgtatattttgcactcagccaagacgtttggcagct
attggtgtggctgaaagagtggcagcagaaagaagagaaaaggttggccagacagttggt
tatcagatccgattagaaagcagggtttctccaaagacactgttaacgttttgcactaat
ggcatactgcttcgcacgctaatggcaggagacagcactctatcaactgtgacgcatatt
attgtggatgaagtacatgagagggataggttcagtgacttcttgttaataaaactcaga
gatgtgttgcaaaaccagactaatctaaaactaattatttctagtgctgccctagatgca
aatctctttattaggtattttggaagttgcccagtaatacacatacaaggaagacctttt
gaagttaaagagatgtttttggaggacattttacgaagcactgggtatacaaacaaagag
atgataaagtacaaaaaagagaagcagcgagaagagaaacagcaaagcactcttactgag
tggtgttctgctcaagaaaataatagcaaagtggaatctcggagacaaagatctgtccca
agtgcaactgaagagtataatctgttggatgatagtggtgatgcagtatttaatcaactg
actgaaaaagatgcgaattgccttgaaccgtggctaataaaagagatggattcttgtctt
tctgacatctggttgcataaagacattgatgcctttgctcaagtgttccatctcatttta
accgaaaatgtcagcgttgattataggcacagtgaaaccagtgcaactgcactaatgatt
gcttcagggagaggatttctgagtcaagtagaacaactgatcagtatgggagcaagtatc
cactgcaaatcatccaatggctggatggctttggactgggctaagcgctttggacagaca
gaggttgttgacctgttggagtcctacagcgcttcagtggaatttggaaatcttgacgaa
agttccctcgtccaaacaagtggtagtgaccttagtgcagaagacagagaactattgaat
gcttatcatcacagttttgatgatgaaaaagtagatctggacctgattatgcacttactt
tataacatctgtcgtagttgtgatgctggagcgattttagtatttcttcctggatatgat
gagatagttagcctgagggaccgtattctttttgatgacaagagatttgctgataatgct
cacagataccaagttttcatgcttcattcaaacatgcagactttggatcagaagaaggtg
cttaaaagtccaccttctggcatccgcaaaataattctttctactaatattgcagaaacc
agcataacagtcaatgatgttgtatttgttattgactcaggcaagatgaaagagaagtct
tttgacgcactgagttgtgttacaatgctaaaaatggtgtggatttcaaaagccagtgct
atccagagaagaggcagggctgggcgctgtcagccgggagtctgttttcatctcttcagc
aggctccgatttcagaatatgttggaatttcagactccagaacttctaagaatgccactt
caggagctttgtttacacacaaaacttctggctccgataaactgtccaattgttgacttt
cttatgaaagctcctgatcctccaccagctttaattgtgagaaatgctgtgcaaatgctg
aagacaatagatgcgatggacccttgggaagatctcactgaacttggttatcatctcact
gaattaccagtagagccacaccttggtaaaatggtgttgtgtgctgttgttttgaagtgc
ctggatcctgttcttactattgcttgcactcttgcatatcgagacccttttgtcctacct
acactggcctctcaaaagcgtgcagccatgctgtgtagaaaacgctttactgcaggaaca
tttagtgaccatatggtgcttctcagggctttccaggcatggcagaaggcgcgcagtgat
ggctgggagagagcgttctgtgaaaagaacttcctgtctcaagcaaggatggaaatcatt
ataggaatgagaacacagttgcttggccagcttagggcctcaggttttgttagaagcaga
ggaggagccgatattagagatgttaatactaattctgaaaactgggctgtagttaaagct
gccctagcggctgggatgtatcccaatctagtgcatgtagacagagaaagcctggttttg
actggaccaaaggagaagaaagtgcgatttcatcctacctctgttcttagtcaacctcag
tataaaaagattcccccagcaaatgggcaagctgcagccattcaggcactccctacagac
tggcttatatatgatgaaatgacgagagctcacaggatagcaaatatcagatgctgttct
gttgtaacacctgtcactgtgtcactcttctgtggaccagctagattaccaagtaatgct
ttgcaggaaccttcatcctttcgaggggatggggtatctaatgataacagtgatagtgag
atggaggacaaaacaactgctaatttggcactactgaagttagatgaatggctccatctc
agactggaccctgaagctgctggtttgttgttgcaactcagacagaagtggcatagctta
tttctgcgtcgtatgcgagctccttctaaaccatggtctcaagttgatgaaataactgta
agagcaattgtaactgttttaagtactgaagaacagtctgcaggtttgcagcagccttca
ggaattggtcagagaccaagacctgtgacttgtggagaacttcctttagcatctacatgg
aagtcaaccaacagtagaaaaagctcagcagaaactgaattctctgatgactcctctaat
gctgaaaaagttctaatgaaatctacacctcccacacttcaccagccaaagaagtacaaa
gaaaagaacattttgcactccaaacgaacttcggacgacaggtcagatcaatcatcagtg
aagtctacagacagcagtagctatcctagcccctgtgctagtccttctccattatctgga
aagggttccaaatctccttcaccaagaccaaatatgccatttcggtactttataatgaaa
agtagcaatgtgcaaaacattgatatttctcagcagaagggtatatggtctactacgcca
agtaatgaacgaaaactaaatagagccttttgggagagcagcacggtttacttaatattt
tctgttcaagggtctggacactttcagggttttgctagaatggcttcagagatagggtgt
gagaaaagtcaagactggggatcttctggcttcggaggtgtatttaaggtggagtggatc
caaaaagaaagcattccttttcattttgcacaccatttgctcaacccttggaatgacaat
aagaaagtacaaataagcagagatggccaggagctggagccacaagttggaaagcagttg
ctacagctttgggaccgtattcctttggcagcaaaaaactcaactgattga
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integrated database retrieval system
