Harpia harpyja (harpy eagle): 128138766
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Entry
128138766 CDS
T10541
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03030
DNA replication
hhar03410
Base excision repair
hhar03420
Nucleotide excision repair
hhar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128138766 (RFC1)
03410 Base excision repair
128138766 (RFC1)
03420 Nucleotide excision repair
128138766 (RFC1)
03430 Mismatch repair
128138766 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhar03032
]
128138766 (RFC1)
03400 DNA repair and recombination proteins [BR:
hhar03400
]
128138766 (RFC1)
DNA replication proteins [BR:
hhar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128138766 (RFC1)
DNA repair and recombination proteins [BR:
hhar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128138766 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
Rad17
AAA_22
BRCT_2
AAA_5
RNA_helicase
AAA_30
RuvB_N
AAA_18
AAA_16
AAA_17
AAA_33
AAA_7
nSTAND3
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
128138766
NCBI-ProteinID:
XP_052636181
LinkDB
All DBs
Position
2:64366048..64408117
Genome browser
AA seq
1165 aa
AA seq
DB search
MDIRKFFGVVPPGKRQACDTVKKSEKIKNGEGSSSGKKREKETKVNNSPSEDDSKQKRTN
KKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLGKVLKQHPVVYISETGIVRIPLCTCY
ILLDEEDDFVNKRISLKPKENGTSAIGCPGTTVKKEDVKPRAKSKPLSPVKQTLTSALDY
FGTSSVQRSEKKLVASKRKEPPQSRDSTLDDEAIARQLQVEEDSELERQLHEDEEFAKTL
AMLDETPQKKKARKGSGGEQTVLSIKSSPNVTERYKQSQRVKATNSTGEAKNYAAKQQTK
SEHSKGSRLSPQSSDGKVPRDLMDKTLPLKPSSKLLSLKQKEEIAEKERGAQSLVSKEKT
SSGKEEKTTPKKEKISPKKTESASPEDSEKKRINYQAYRSFLNREGPKALGSKEIPRGAE
NCLEGLTFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKAST
LGTKVIDEDGLFDLIRTMPGKKSKYELAAETEAKKAESRPKKTPQKAEAGKRNFSPFKRE
ADKKYKSTPEKGDTVKSVKKETTAVRKLMDFKWQTVEKKEAPKPEGNLVSETNEDGTERL
LWVDKYKPVSLKAIIGQQGEQSCANKLLRWLRNWHKNTSEDGQAKTNKSGGKDDGTGFKA
ALLSGPPGVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGT
SSSVSGKHVLIMDEVDGMAGNEDRGGIQELIGLIRNTKIPIICMCNDRNHPKIRSLVHYC
FDLRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKS
LTYDEAKTDASRAKKDLKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQE
NYVHVKPAAAGGNLKKHLVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGE
LMRGYMSQFPVFPSWLGKFSSTGKHDRIIQELAMHMSLRTQTCKRTVNMEYLPYLRDAVV
QPLKDFGADGVQEAITFMDSYCLMKEDIENIMEVSTWGGKPSPFSKLDPKVKAAFTRAYN
KEAHLTPYSLNSVKPSKRQLGSVVISELNEDLNVEEIQSDEDEQDTVESDAMIKQKKAKS
SKLPKREKNEETTKKEGKRKEKTRH
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggtgttgtacctcctggaaagcgacaagcatgtgacact
gtgaaaaagagtgaaaaaattaaaaatggtgaaggatcctcaagtgggaagaaaagggaa
aaggagactaaggtgaataattcacccagtgaagatgattccaaacaaaagcggacaaac
aagaaaaaaagaataatctacgattcagattcagaagaggaggtgcagtcagtgaaaaaa
tccaagaagccatctgagaaaaaagcagctacttcaaaacttggtaaagttctaaagcag
catcctgttgtttatatttcagagacaggaatagtcaggatccccctttgtacttgttat
attctacttgatgaagaagatgactttgtcaataaaagaatttccctgaaaccgaaggag
aatgggacatcagcaattggttgtccaggaactacagtgaaaaaggaagatgtaaaacca
agagctaaaagcaaaccattatctccagtgaaacagactctcacctctgcacttgattac
tttgggacaagtagcgtccaacgatcagaaaagaaactggtagcaagtaaaaggaaagaa
cctccacaaagcagagacagcacactagatgatgaggccattgctaggcaactgcaggtt
gaagaagattcagagctggagagacagctgcatgaagatgaagaatttgctaaaactttg
gccatgttggatgaaacaccacagaagaaaaaggctcggaaaggttcaggaggagagcaa
acagtattgagcatcaagagcagtcctaatgtgacagaaagatataagcagtcacaaaga
gtgaaagcaacaaactcgacaggtgaagcaaagaattatgctgcgaagcagcaaactaaa
tctgaacattcaaaaggctctcgtttatccccacaatcatctgatggtaaagtaccaaga
gacttgatggataagaccttgcctttgaaacctagctctaagcttctgtctctgaaacaa
aaagaagagattgctgaaaaggaaagaggtgctcaaagtttagtatcaaaagaaaaaact
tcttcagggaaagaagagaagacaacaccaaagaaggagaaaatttctcccaagaagact
gagtctgcaagtcctgaggactctgaaaagaagcgaatcaattatcaagcctaccgaagc
ttccttaatcgcgagggtccaaaagcactgggttccaaagagatacctcggggagctgaa
aattgcttggaaggcctgacatttgtaattacaggcgtactagagtgtattgaaagagat
gaggccaagtctctgattgaacgttatggaggaaaagtaactggcaatgtcagcaagaag
acaaactatctggtcatggggcgagactgtggccaatctaaatgtgaaaaggcatcaact
ttagggacaaaagttattgatgaggatggcctgtttgatcttattcgaactatgccaggc
aaaaagtccaaatatgagctggcggctgaaacagaggcaaagaaagcagagtcaagacct
aaaaagacaccacagaaagctgaagctggaaaaaggaattttagtcccttcaaaagggaa
gctgataaaaaatataagtctactcctgaaaaaggagataccgtcaaatctgttaagaag
gaaaccactgctgttcgaaagcttatggactttaaatggcagactgtagagaagaaagaa
gcccccaaacctgaggggaacttagtttctgagactaatgaagacggaacagagagattg
ctatgggtagataaatacaagcccgtatctcttaaggcaataattggacagcagggtgag
caaagctgtgccaataaactgctccgatggctcagaaattggcacaagaatacctcggaa
gatggacaagcaaagaccaataaaagtggaggcaaagatgatggtactggttttaaagca
gcattactttctggtccgcctggagttggtaaaactactacagcttctttggtttgtaag
gaactggggtatagctatgtggagctgaatgccagtgacactcgcagtaagaacagtcta
aaggaagtagttgctgaatcacttaacaacaccagcatcaaagacttctgttctggcaca
tcctcatcagttagcgggaaacatgtattgatcatggatgaagtggatggtatggcaggc
aatgaagacagaggagggattcaggagttgattggtttgattagaaatacaaagataccc
atcatctgtatgtgtaatgatcgaaaccatcctaaaattcgttccttggtccactactgt
tttgatcttcgttttcagagacctcgtctagaacagattaagggtgccatgatgtctatt
gcgtttaaagaaggtttaaaaattccaccacctgctatgcaagagataatcctggcagca
aatcaggacatcagacaggttttacataatcttaatatgtggtgtgcgaaagataaatca
ttgacttacgatgaggctaaaacggatgccagcagagccaaaaaggatctcaaactgggc
ccttttgatgttgtccggaaggtttttgctactggagaggaggcttctcgtatgtctctt
atagacaaatcggatcttttcttccatgattattccctagcacctctctttgtccaagag
aactacgtacatgtgaaaccggccgctgctggaggaaatctgaaaaagcacttggtcctc
ttgagtagagcagctgatagtatatgtgatggtgatatagtggacaaacagattcgtagc
aagcaaaactggaaccttcttccaacacaggctatttacgcaagtgttctcccgggggag
ctgatgagaggttacatgtcccagtttcctgtctttcccagctggctggggaaattttca
tccacaggcaaacatgatcgtatcattcaagaactggcaatgcacatgagtctcagaacc
cagacgtgcaagaggacagtaaatatggagtatttgccgtatctgcgggatgcggttgtc
cagcccttgaaagactttggagcagatggtgtacaagaagctataacgttcatggactct
tactgcttgatgaaagaagatattgaaaatatcatggaagtaagcacgtggggaggcaaa
cccagtcctttttcaaagctggatcccaaggtcaaagcagcttttacacgtgcctacaac
aaagaggcacatctgactccatattcacttaattctgtcaagccatctaaaaggcagttg
ggatctgtggtgatctcagaactgaatgaagacttgaatgtggaagagatccagtctgat
gaggatgagcaagatactgttgaaagtgatgcaatgattaagcaaaaaaaggcaaagtct
tccaagctgccaaaaagagagaaaaatgaagaaacaacaaaaaaagaagggaaaagaaaa
gagaaaacaagacattaa
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integrated database retrieval system
