Harpia harpyja (harpy eagle): 128139192
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Entry
128139192 CDS
T10541
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128139192 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhar03041
]
128139192 (CDC40)
Spliceosome [BR:
hhar03041
]
Complex C
Other components
Step II factors
128139192 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
128139192
NCBI-ProteinID:
XP_052637216
LinkDB
All DBs
Position
3:6290304..6331439
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AA seq
618 aa
AA seq
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MSYLVKRSPSPLVLRGKGHGELPRSCQDPLVPSSPAPKMSAAIAALASYGGSDSEPDSEP
EAEGGSQRAAVLASRDAVLHLRPPPAAPPALAVDAAPEVAVKEDVETGVHLDPAIKEVQY
NPTYDTMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDP
SIDNPEVATKYIGSVEEAEKNQGLTVFETGQRKIEKRKKFKENDASNIDGFLGPWAKYVD
EKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDV
GVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHILLSCSMDCKIKLWEVYGD
RRCLRTFIGHSKAVRDICFNNAGTRFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF
NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS
LRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKI
FKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPH
ETSKVITCGWDGLIKLWD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccttgtaaagcgcagccccagcccgctcgtcctgcgtgggaaggggcacggc
gagcttccgcggagctgccaggacccgctcgtcccgtcatcccccgcgccaaagatgtcg
gcggcgatcgccgcgctcgcctcctatggcggctccgactcggagcccgactcggagccc
gaggccgagggcggctcccagcgcgccgctgtgctcgccagccgcgacgccgtgctgcac
ctccgcccgccgcccgccgcccccccggccctggccgtcgacgcggccccggaagtcgcc
gtgaaggaagatgtggaaacaggagtccaccttgatcctgctatcaaggaagttcagtac
aatcccacttatgataccatgtttgcacctgagtttggaccagaaaacccatttaggact
caacaaatggctgcacctagaaatatgctttctggatatgcagaaccagctcacattaat
gatttcatgtttgaacaacaaagaagaacatttgcaacctatggttatgcattagatccc
tctatagataaccctgaagttgctaccaaatacattggttctgtagaagaagctgaaaaa
aatcaagggttaacagtgtttgaaacgggacaaaggaagattgaaaaaaggaagaaattc
aaggagaatgatgcatctaatattgatggttttctgggaccatgggcaaagtatgtcgat
gaaaaagaagtagccaaaccatcagaggaagaacagaaagagttagatgaaataacagcc
aagaggcagaagagaggaaaactagaagatgataaacctggagaggagaagactatatta
catgttaaggaaatgtatgactatcaggggagatcttatcttcatgttcctcaagatgtt
ggagttaatctccgttctacagtgccgcctgagaagtgctatcttccaaagaaacaaatc
catgtgtggtctggacatacaaagggtgtcagtgcagttagattgtttcctctctctggg
catatactgttgtcttgctctatggattgcaaaattaagctgtgggaagtatatggtgat
cgaagatgtctacgaacatttattggacatagtaaagctgttcgagacatctgttttaat
aatgctggcactcgatttcttagtgctgcatatgaccgctatcttaaactctgggacact
gaaacagggcaatgtatttcaagattcacaaacaggaaggttccttattgtgtcaagttc
aatcctgacgaagataaacaaaatctctttgttgcaggaatgtcagacaagaaaattgtg
cagtgggatattcgaagtggtgagattgtgcaggaatacgacaggcatttgggagctgtc
aacaccattgtgtttgtggatgaaaatagaaggtttgtgagtacatctgatgacaagagt
ttaagagtctgggaatgggacattcctgtagacttcaagtacatagctgagccaagtatg
cattcgatgccagccgtgactttgtctccaaatgggaaatggttggcttgccagtcgatg
gataaccaaattctgatttttggagctcagaacagattcagattaaacaaaaagaaaatt
ttcaaaggtcacatggtagctggctacgcttgtcaagtggatttttcacctgacatgagc
tatgtgatatctggagatgcagatggaaaacttaacatctgggactggaagacaacaaaa
ctctacagcagattaaaagcgcatgataaagtctgtatcggtgcagtgtggcatccacac
gaaacatctaaagtcattacatgtggctgggatggtcttattaaactatgggactaa
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