Harpia harpyja (harpy eagle): 128139554
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Entry
128139554 CDS
T10541
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar04140
Autophagy - animal
hhar04148
Efferocytosis
hhar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128139554 (VPS18)
04148 Efferocytosis
128139554 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128139554 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhar04131
]
128139554 (VPS18)
Membrane trafficking [BR:
hhar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128139554 (VPS18)
Hops complex
128139554 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
128139554
NCBI-ProteinID:
XP_052638074
LinkDB
All DBs
Position
3:40066676..40078457
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTGE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPANFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDIREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccattctggacgagtacgaagattccctgtaccgctccgcctccgtgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acaccaatatttaacaagcaaaggattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccggtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgagcactctcccgctggaaaggccac
ttgattgaaagtgtgggctggaacaaatttcttggttcagagaccaacactgggcctatc
ttggtggggacagcccaggggcagatctatgaggctgaaatctctgtcagcgagggaagc
cttttcagcactaaccctgaccagtacttccgacaggtctacactctggaggaggaatcg
ggacctgccccagtctgctgcttggagattgaacgtggaatagaagggaagttttttatt
atagccactactcggaagagactcttccagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagcttccgggag
tttccagccaactttggtttcagtgagatagctttttacaccccaaaactgcgctccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacgttggattatagc
cgtcctgattcaattttgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagttccacttcctgttgctgctgcct
gatcgggtgaaggctgtatgcactctgaatgggcaggttgtttttcaggatctgttcctg
gagaagtttggcttactgacacgcatgatcaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccatgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagccaaagagtattgtaaagaccgtccagag
tgcctggatattgtgctggcgaaagaggcagagcactgcttccaaaacaagaggtatcta
gacagtgccaaatgttatgcgctgacccagaactactttgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtaaccta
aagccttccgagaagacacagaccactctgctgaccacatggttaacggagctgtacctg
aactggctaggtatattggaaggagatccctcacagcgaaatctctatttggatatccgc
gagaagtttcgcactttcctgagcagtcctaaaaacaaagactgtctatttaataaccgg
gcatctatttatgagctgttggcaagccatggggacacagagcacatggtctactttgca
gttatcatgcaggactacgagcgtgtagtagctcaccactgccagcatgatgagtatgat
gaagctctaaatgtgctgtccaggcacagagatgagaagctgttctacaagttctctcca
gtcctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggttctaga
ctggatgccaggaacctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactacctgttgtctctttacgctttgtgtcggccagactcactgcta
tcatacctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtatgca
ttgcgcctatgtgcagagcatgggcaccaccatgcatgtgtccatatttacaaagtgatg
gaattatatgaggaggctgtggatcttgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaagcaatggcctgcctctccagctgt
gccctactgaagattgaagacgtcctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaatccgagaggacattcaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcattatgactgtctcctc
caagcagttttcccaaaccttcctgcctataagcaggcaaaactcgaagatcttcagaag
aagctggcagctaccagtcagccttccaagagccaccatcgtcccaaagatgcagatacc
attagcttggggaaagggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagccgaatgtgtgtactgtggtgagctgatgatccggtctattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
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