Harpia harpyja (harpy eagle): 128139592
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Entry
128139592 CDS
T10541
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar04140
Autophagy - animal
hhar04142
Lysosome biogenesis
hhar04145
Phagocytosis
hhar04148
Efferocytosis
hhar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128139592 (VPS39)
04142 Lysosome biogenesis
128139592 (VPS39)
04140 Autophagy - animal
128139592 (VPS39)
04148 Efferocytosis
128139592 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128139592 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhar04131
]
128139592 (VPS39)
Membrane trafficking [BR:
hhar04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
128139592 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
EcoR124_C
LIF1_N
DUF4145
Motif
Other DBs
NCBI-GeneID:
128139592
NCBI-ProteinID:
XP_052638148
LinkDB
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Position
3:complement(41625648..41653255)
Genome browser
AA seq
884 aa
AA seq
DB search
MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDIGEVMSSESVCCNRF
EVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTC
DLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFK
RDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALN
WTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHF
VWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRF
DESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQ
KRSQLVKKLNDSDHQSTTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRL
ENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQY
LQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIP
YLEHIIHVWEETGADFHNCLIQLYCEKVQALMKEYLSSYPADRTPVPAGEEGGDLGDYRK
KLLLFLEKSSWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENY
CHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKL
DTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQV
KCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagcatgtgccgatcttggagaaactgccgctgcagatcgactgc
ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttttgctttac
aggatcaagaaagacataggagaggttatgtcatcagaaagtgtctgttgcaataggttt
gaagtgacactagagaaatccaacaagaacttctcaaaaaagattcagcagattcatgtt
gtttctcagtttaaaattctggtcagtctattagaaaataacatttatgtccatgaccta
ttgacatttcaacaaatcaccacagtttccaaggcaaaaggtgcatctctcttcacttgt
gatcttcagcagtcagatacaggggaagaggtgctgagaatgtgcgtggcagtgcggaag
aagctacaactttatttttggaaggacagagagttccatgaactacagggggacttcagt
gtacctgatgtaccaaagtctatggcctggtgtgaaaactccatctgtgtaggcttcaag
agggactattacctgatacgggtggatggaaaaggatccatcaaagaactgtttcccaca
gggaagcagctggaaccattggtagctcctgtagcagatggaaaagttgcggttggccaa
gatgatctaacagttgtgctaaacgaagaaggggtctgtactcagaaatgtgccttgaat
tggacagatattcctatagccatggaacaccagcctccctacatcattgctgttctgccg
aggtatgtggagattcgcacttttgagccccggctgctggtacagagtattgagctgcag
agaccacgcttcatcacctctggaggcacaaatattatatatgtggcaagtaatcacttt
gtttggcggctcattccagtgtcaatagccacacagatccagcagcttctgcaggacaag
cagtttgagttggctttgcagttggcagaaatgaaagatgattcagatagcgagaagcga
caacaaattcaccacataaagaacctctttgccttcaacctcttctgccagaagcgcttt
gatgaatccatgcaagtttttgccaagcttggtacagatcccactcacgtgatgggtctg
tatcctgacctcctgcccacagattacaggaaacagctacagtatcccaaccccctgcca
gggctctctggggcagagctggagaaggcacatttagctctgatagactacctaactcaa
aaaagaagtcagctggtgaagaagctaaatgattctgatcatcagtccactacgtcaccc
ctcatggaaggaacacccacgatcaaatccaaaaagaagctgctacaaatcattgatacc
acccttttaaagtgttacctccatacaaatgtagcactggtggcaccattgctacgtctg
gagaacaatcactgccatattgaggagagtgagcatgtactaaagaaggcacacaaatat
agtgagctgataatactgtatgagaagaaaggtctgcatgagaaagcattacaggtgctg
gtggatcagtcaaagaaagccaactcacctttgaagggtcatgagaggacagtgcaatat
ctgcagcatttgggtacagagaacttgcacttggtattttcctactctgtctgggtgcta
agagattttcctgaagatggactgaaaatatttacagaagacctccctgaagtggaagct
ttgccacgagacaaagtgctcagtttcttgatagaaaattttaaaagcttgactattcct
tatctggaacacatcattcatgtctgggaagaaaccggtgcagactttcacaactgtctg
atccagctgtactgtgagaaagtgcaggccttaatgaaagaatatctcagttcttatcct
gcagatagaactccagtgcctgctggggaggaaggaggagacttgggggattaccggaaa
aagcttctactttttctggagaagtctagctggtatgaacctagtcgactaattagtgac
ttcccctttgatggtctcctagaagaacgtgctctgctcttgggtcgtatggggaagcat
gagcaagctctgtttatttatgttcatattttgaaggacaccaacatggctgaaaactac
tgccataaacattatgacagaaacaaagatggcaacaaagatgtctatctgtcactgctt
cggatgtatctctccccacctagtgttcattgcctgggaccaatcaagatggaagtgctg
gagcctcaagctaatctgcaggctgctctgcaggttttggaactacatcacagcaaacta
gataccaccaaggcgataaacctgctcccagcaaatacccagattagtgagattcgaatc
ttcttagagaaagtccttgaagaaaatgctcagaagaaaagatttaatcaagtactcaag
aatcttctccatgcagagtttctgagggtccaggaggagcggatcttgcatcagcaagtg
aagtgcattattacagaggagaaggtgtgcactgtatgtaaaaaaaagataggtaacagt
gcatttgctcgataccctaatgcaatagtcgtgcattatttctgctccaaagaagtcaac
acactggacacctga
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