Harpia harpyja (harpy eagle): 128140993
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Entry
128140993 CDS
T10541
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
hhar Harpia harpyja (harpy eagle)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
128140993
NCBI-ProteinID:
XP_052641475
LinkDB
All DBs
Position
1:complement(31722175..31774545)
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AA seq
1473 aa
AA seq
DB search
MLIHTCFFFACLPVASHVWGRAGQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNSGAASGKNLTSSGSSAAEHSGVAEATPPPLNAVLTQPAKDKAEKKRQKGTQPKGS
GETTRNQPGLEASVTGATPTTTRSSQRTPANSERESLGKEKAPKDSLRRGSQFQCNTSAM
TDIILLVDGSWSIGRNNFKLIKEFLSNLISPFSIAQDKIRVGLSQYSSDPRTEWDLSTYS
TRDQVLEAVRNLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAVKLVILLTDGKSQDDAN
LAAQTLKNLGIEIFAIGVKNADEAELKQVASEPLGLTVYNVLDFPLLSSLVGRLNRVLCT
RIKEKSNKENAGSTVKDIPVNMGPQLSPSDLKISAVTSKSMYLTWSPPPRPPKKYRIVYY
PSKGGIPKEVLLDGAVSSLRLSNLTSHTEYLVSVFPIYDTVVGDGLRGVTSTLPLSSPRS
LRVSELSHNSIRLSWKAAQGATQYLVLCSAAPDGAEDYTTEVKVAQPEVLLDGLSPSTEY
SVAVYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEAASPAVKAHHVTYV
SSRGSNAGEVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPRA
LKVTELSGNSLRLQWEAVAASDVVVYQIKWSTVGGEKPQELSIAGNVASAVLPDLQKNTD
YKISIWAYYKDGARSDTVSVQHRTNSRSPPTNLFIDSETPTSLQLHWTPPDGRVQHYKIT
YNPVSDAGAQQTIMASGKSSSVTLQSLLPDRAYKVILSAIHYTGESESTSTTGRTAPVLS
KFPSVRGFVPSKTEACPTISSTKGSVRGFDMMEVFGLVEKEYASIKGVAMEPFIFSGSRT
FTLFRDTQLTLRTSDVHLFAIPPEHTISILLRLLPETPKEPFAVWQITDEDFQPLLGVNL
DPSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLDCKKIAEK
PINTVGSISTAGFIMLGKVTRTRGPRSGSASFQLQSLEIMCSSIGAEEDRCCDLPALRDE
ETCPTLAPACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEGPSG
QQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEGT
AGPPGPPGPRGFQGVTGSRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVS
QACERMIQTHVLKFDSFIHEHARKPVPVWEERLKPGEPGPPGPPGPPGSNGERGENGIRG
QPGKDGYPGERGAPGPKGEKGMSGASEEGIQGPRGRTGPPGEVVLGKPGPKGHPGNAGPQ
GFPGVRGQPGQSGYPGGCDISGCYGAGRRDFIP
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcacacttgtttcttttttgcctgcctgcctgtggcgagccatgtgtgggga
cgagcgggccaagggtcaggccggctgaaactcactgtcctttcggaagacaggctccaa
atgaaatggaaagagactgaagggaacatcaatggctacaaagtccgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactcccaaagccacagtgggg
gggctgagccctaccaaggaatacacgctgcaggtctatgtgctcaacggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaggagctaaaaaatgcatcccagactaga
aataaccgaagaaactcaggagctgcttcaggaaagaatctcacctcttcggggagctca
gcagccgagcacagcggggtggcagaggccaccccaccacccctgaatgctgtcttgaca
cagccagcaaaggacaaagctgaaaagaaaaggcagaaggggactcagccaaagggctcg
ggagaaaccacaagaaaccagcccggtttggaggccagcgtgacaggagcgacaccaaca
accacaagatcatcccagcgcactcctgcaaactcggagcgagagtctctaggaaaagaa
aaagccccaaaggattcattgaggcgaggttcccagtttcagtgcaacacatctgcaatg
actgatatcatcctgcttgtggatggatcctggagcattggacgcaacaatttcaagctc
attaaggagtttctgagcaatctgatttccccattcagtattgcccaagacaagataaga
gtagggctgtcccagtacagcagcgatccccgcacagagtgggatctgagcacttactct
acaagggaccaggtgctggaggccgtgagaaatttgcggtacaagggcggcaacaccttc
acaggtctggcactgacccacgtcctggagcagaatctgaaaccagatgctggtgcccgg
ctagaagccgtgaagttggtaatactcctgactgatggaaaatcccaggatgatgccaac
ctggctgctcagaccttgaaaaacctgggcatagagatatttgccattggggtgaagaac
gcggacgaggcagagctgaagcaggtggcctcggagcctctggggctcaccgtgtacaac
gtgctggatttcccactgctgagctctctagttggcaggctcaaccgggtcctgtgcacc
aggatcaaagagaagagcaacaaggaaaacgcaggcagcactgtgaaagatatccctgtg
aacatgggtccccagctgagcccaagtgaccttaaaatatcagctgtgacctctaagagc
atgtacttgacctggagtcctcctccgagaccaccaaagaaataccggattgtgtattat
ccatctaagggtggtatccccaaagaggtgcttttagatggagcagtctcctctttgcgg
ctttccaatttgacctcgcacacggagtatctggtgtcggtgtttcctatttatgacaca
gttgttggggatgggctgagaggcgtcacctccacattgcctttgtcttcccctcgctcc
ctgcgcgtctctgagctgagccacaacagtatcaggctgagctggaaggcagcccaggga
gccacgcagtacctggtgctctgctccgcagcccccgatggagcagaggactatacaacg
gaggtgaaggtggcccagcctgaggtcctactggacgggctgtcacccagcacggagtat
tctgtcgcagtgtacgccatgtacggggaagatgcgagtgatccagccagcatccaggaa
accaccctggccttgagtcctcccagatacctgagcttctccgagctcagccatgcgtct
gttcgagtcagctgggaggctgcgtctccagctgtgaaagctcaccatgtcacctatgtt
tctagcagagggagcaacgctggggaggtagaggttcctggtactgcaacatccactgtc
ctaagacctttgtcctccctcacccaatacttcatcagtgtcagatcgacgtatgatgaa
ggggactcctttccgattactggcaatgttaccactttaaaggtccccccaccacgtgca
ttgaaggttaccgagctctctgggaacagcctccgactgcagtgggaagctgtcgctgcc
tccgatgtggttgtctatcagatcaaatggagcacagttggtggagagaagcctcaggag
ctctccatcgctggaaatgtggcaagtgctgtcctcccagacttgcagaagaacactgac
tataaaatatccatctgggcctattacaaagatggtgctcgaagcgacacagtttctgtt
cagcacaggaccaattcccggagcccacccaccaacctcttcattgactctgagaccccc
accagcctccagctccactggaccccccccgacggccgcgtacagcactacaaaatcact
tacaaccctgtttctgatgccggtgctcagcaaacaatcatggcttctggcaaaagcagc
agcgtgaccttgcagtcgctgctgcctgatcgagcctacaaggtgattctttctgccatc
cactacacgggagagagcgagagcacgtccacgacaggccggacggctcctgtgttgtct
aaattcccttcggtacgaggattcgttccatctaaaacagaggcctgccccaccatcagc
tctaccaaaggctccgtacgaggatttgatatgatggaagtttttggcttggtagagaag
gaatacgcctccattaaaggcgtagctatggagccattcatattcagcggttcccgtacc
ttcaccctgttcagagacactcagctcaccctgaggaccagcgatgtccacctctttgca
atcccacccgagcacaccatcagcatcctcctgcgcctcctgcccgagacccccaaggag
cccttcgctgtgtggcaaataacagacgaggacttccagccccttctcggtgttaacctt
gaccccagtaagaaatccttgacctatttcaatcatgactacaaggctgatttacaggaa
gtctcctttgaccagcaggaagtgaagaagatattctatgggagcttccataaggtgcac
gtggccgtgagccacttcaagatcaaactctatctggactgtaagaaaatagcggagaaa
cctatcaacaccgtcggcagcatctccactgccggcttcatcatgctgggaaaagtgaca
aggaccagaggacccaggagcgggtctgcatcgttccagctgcagtctttggagatcatg
tgcagcagcataggggcagaggaagacagatgctgtgatctccctgcgctgagggatgag
gagacctgccctaccttagctcctgcctgctcttgtacttctggccgcccgggcttgcca
ggacctccagggccccctggcagccctgggaggagaggacctcaaggggagcagggcgag
ccaggacccaagggtgaaccaggcccacctggacaagtagggccagagggtcctagtggc
caacaaggctctccaggttcccaaggaatcacagttcagggtcctgtgggaccaccagga
attaaaggagagaaaggagacactggaagtcctggcatgcagggcattcctggtgtgcag
ggagctccaggcagggatggtcttcaaggtgcaaagggggtgaggggactagaaggcaca
gctgggcctccaggacctcctggaccaaggggtttccaaggagtgacaggctcccgaggc
agcagtggagagaagggacctccaggtgacgttgggccaacagggctgccgggtccgaaa
ggagaaagaggagagaaaggggaaccacagtccttggccacaatttaccagctcgttagc
caggcttgtgagcggatgattcaaactcatgtgttgaaatttgactcattcattcatgaa
catgcaaggaagccagttcctgtttgggaagaaaggttaaaaccaggagaaccaggacca
ccaggtcctccaggtccccctgggagcaacggagaaagaggagaaaatggcatccgcgga
cagccaggcaaagatgggtatcctggagaaagaggtgccccagggcccaaaggagaaaaa
gggatgtctggagccagtgaggaagggatccaaggacccagaggcagaacaggcccacca
ggagaagttgtgctggggaaaccaggtccaaagggtcaccctgggaatgctggtcctcaa
ggttttcctggtgtcagagggcagcctgggcagtctggatatccagggggttgtgatatc
tctggatgttacggggcaggtagaagagatttcatcccctga
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