Harpia harpyja (harpy eagle): 128144155
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Entry
128144155 CDS
T10541
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
hhar Harpia harpyja (harpy eagle)
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhar04147
]
128144155 (COL18A1)
00535 Proteoglycans [BR:
hhar00535
]
128144155 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
hhar00536
]
128144155 (COL18A1)
Exosome [BR:
hhar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128144155 (COL18A1)
Proteoglycans [BR:
hhar00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
128144155 (COL18A1)
Glycosaminoglycan binding proteins [BR:
hhar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128144155 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
128144155
NCBI-ProteinID:
XP_052648524
LinkDB
All DBs
Position
7:complement(13872392..13913847)
Genome browser
AA seq
1759 aa
AA seq
DB search
MAPAPPHLGFLLLLACCFSPSEMQLLDWVWGSTKTTESPAIPSKETTAPEPLASAAAPTP
SVSPGTWDGQVVGDVTTPQRQEPDPSTATPMGKGTAAENTEQWDWNATGLVESTARPSIA
PPRSTSLAPDQDVASSSTDDPQLLGTGTTKDPQLLGTGTTEDPQLLGMGNTEDPQFLGTG
TPAATRTQVSLQRPAGPRPGSAPFPFSPGDSTRDQAVPPWDPTAQPPRYHHGASPAAPNL
RHGTGHQGLVLAGMNGSQSPSLPNRRVANGVDPPLANNSGPLEFDLLTATMQLYGSSGTG
LTSFLLGLMPPAGHCLPIPTRLPFCSVLGTNHFRLPNYLRHSSEAEIRAALHEWEGLLES
RCHRYVEWFLCLLLLPGCSASVPVTPPPCQGFCEAVRDLCWMHLAGGHLPLPCDALPKED
EGYSCVFINASAENLSTEVSLLELIGDPPPEEILKIYGPDNNPGYVFGPNANTGQVARYH
LPSPFYRDFSLLFHIQPTTPRAGVLFAVTDSSQSIIYVGVKLSELQAGKQKIIFYYTEPG
SPSSYAAATFTVPTLLNQWTRFAISVEEDEVILYLDCEEHERVPFERSPDEMELEDGSGL
FVAQAGGADPDKYQGVIADLKLQGDPRAAERQCEEEDDDTEEVSGDFGSGAEGGRQPSGK
VGGVPGLVDAVPVTAPPVVAGSGPRSGGGSLQQAERTRAEETLRVSAGGTGPKGEKGEKG
ERGLKGDSGTGGIVGMGSVKGEKGEKGELGIKGSAGFGYPGSKGQKGEPGEPGPPGTLSR
HADGSVVEQVTGPPGPPGKDGAPGRDGEPGDPGEDGKPGDMGPQGFPGTPGEPGLKGEKG
DPGVGPRGPPGPPGPPGPPGPFSKHDKLTFIDMEGSGFGGDLESLRGPRGPPGPPGPPGV
PGLPGEPGRFGMNHTDLLGPPGLPGRDGTPGPPGPAGPQGPPGRDGAAGQPGPKGEQGNV
GDLGLPGAPGPKGNKGEMGPAGAPGEMGLAGLPGPIGPRGQPGPPGPPGPPGRGYEAGFG
DMEGSGLPFTAGSPGPPGPEGPQGVPGLPGVKGEVGSPGQPGLPGLKGDAGVPGVDGRPG
LEGFPGPQGPKGDRGSPGEKGERGQDGVGLPGPPGPPGPPGQVITVSSEDKSLVALPGPE
GRPGHAGFPGPVGPKGERGSSGPQGSPGLKGEKGEPGVIISPDGTVVTAKVKGEKGEPGL
RGPMGPSGPQGRAGMKGEIGFPGRPGRPGMNGLKGEKGDPVDVSSVLGLRGPPGPPGPPG
PPGPPGSIVYDSSNAFSDSSHPALPAFPGFHQFPGQKGEKGDAGAPGPPGHFPYDLSHFS
ASLRGDKGDAGPKGEKGESGSTPLYGPSISGLPGPPGPQGYPGLPGPKGDSIVGPPGPPG
PQGPPGVGYEGRQGPPGPPGPPGPPSFPGPHRQAISIPGPPGPPGPPGPPGTSGMSLGLR
TLPTYQAMLSAAHELPEGSLVFLTDRQELYVRLRGGFRRVLLEEHTLIPSSALDNEVYDK
PPSIHYAGPQPPLQPRGPLHPLHNHSPPPTARPWHGDEVVANQHRLPEQPLLHHQHELLN
SYYIHRRPDPAPVAAHVHQDFQPALHLVALNAPLSGGMRGIRGADFQCFQQARQVGLAGT
FRAFLSSRLQDLYSIVRRADRAAVPIVNLRDEVLFSNWEALFTGSGAPLRAGARILSFDG
RDVLRDVGWPQKSVWHGSDAKGRRLPESYCETWRTEERAVTGQASSLGSGKLLEQMASSC
QHAFVVLCIENSFMTATKK
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggccccggccccacctcacttgggctttctgctcctcctggcttgctgcttctccccc
tctgaaatgcagctcctggactgggtttggggcagcacaaagaccacggaaagcccagcg
atacccagcaaggaaactacagcaccggagccacttgcctctgcagcagctcccaccccc
agcgtgtccccagggacatgggatggccaggtggtgggggacgtcaccaccccacagcgc
caggagccagatcccagcacagcaacacctatgggcaaggggaccgcggccgaaaacacc
gagcagtgggattggaatgccacggggctggtggagagcactgcacggccaagcattgct
cctccgcgcagcacgtcacttgcccctgaccaggatgtggccagcagctccaccgatgac
ccacagctcctggggacagggaccaccaaggacccacagctcctggggacagggaccacc
gaggacccgcagctcctggggatggggaacaccgaggacccgcagttcctggggacgggg
acccccgcagcaaccaggacacaggtgtccttgcagagaccggcgggtccccggccaggt
agtgccccttttcctttctcaccaggtgacagtacccgtgatcaggcggtgccgccctgg
gaccccacggcgcaaccaccccgataccaccatggagcatcgcccgctgcaccaaacctg
cggcatggcaccggccaccaggggctggtgctggctggcatgaatgggagccagagtcct
tctttgcctaacaggagggtggctaacggtgtggatcctcctcttgccaataactccggt
cctctcgagtttgatttactaaccgccactatgcaactctacggtagtagcggcacaggg
ctcacatccttcttactcggactgatgccaccagctggccattgcctgcccatcccaacc
cgcctgcctttctgcagcgtgctgggcaccaaccatttcagattaccaaattacctccgc
cacagcagcgaggcggaaattcgggccgctttgcatgagtgggaggggctgcttgaatcg
cggtgccatcgctacgtggagtggtttctctgcttgctcctgctccccgggtgtagtgcc
tcagtccccgtaacccccccgccgtgccagggcttctgcgaggccgtcagagacctgtgt
tggatgcacttggctggtgggcacctgcctctgccttgtgatgctctccccaaggaggac
gaagggtattcttgtgtctttattaatgcttctgcagagaatctgagcaccgaggtcagc
ctcctggagctgatcggagaccccccaccggaagagatcctcaaaatttatggccctgac
aacaatcccggctatgtcttcggccctaacgccaacacgggccaggtggcccggtaccac
ctgccaagccctttctacagggacttttcccttctgttccacatccagcccaccaccccc
cgggccggtgtgctttttgccgtcacggactcctcgcagagcatcatctatgtgggcgtc
aagctctcagagctgcaggcaggcaagcagaaaatcatcttctactacacggagccgggc
tcgccaagctcatacgcggcggccaccttcactgtgcccaccttgctcaaccagtggacg
cgctttgccatcagcgtggaggaggatgaagtaattctctacctggactgtgaggagcac
gagcgggtcccctttgagcgctccccggatgagatggagctggaagatggctccgggctc
ttcgttgctcaggctggaggggccgacccagataaatatcagggggtgatagctgatttg
aagctgcaaggggacccgcgggcggccgagcgccagtgcgaggaagaggatgatgacacc
gaggaggtctccggcgatttcggcagcggggcagaaggtggccgccaaccctcagggaaa
gtcgggggtgtcccggggctggtggatgctgtccctgtcaccgctccccctgtggtggcg
ggcagtgggccgaggagcggcgggggctccctgcagcaagccgagaggaccagagcagag
gagacactgcgggtctccgcaggaggcaccggccccaaaggtgaaaagggcgagaaaggc
gaacgtggcctgaaaggggactcagggaccggaggcatcgtggggatgggcagtgtcaag
ggtgaaaagggggagaaaggagaactgggcattaagggcagcgctggatttggctaccct
ggctccaagggccagaaaggggaaccgggtgaacccggcccgcctgggaccctctcacgg
cacgccgatggctcagtggtagagcaggtcaccggtcccccagggcctccggggaaggac
ggagcccccggcagggacggcgagcccggcgatcctggcgaggacggcaaacctggcgat
atggggccccaggggttccccgggacaccaggtgagcccggtctgaagggggagaagggt
gacccaggtgtgggaccaaggggaccccctggaccacctggccccccaggaccaccagga
cctttctccaagcatgacaagctgaccttcatcgacatggagggctctggcttcggcggc
gacctggagagcctgcggggtccacgagggccacccggtcccccagggccacccggtgtg
cccggtttgccaggggagccaggacggtttgggatgaaccacacggacctgctgggaccg
ccggggctgccaggcagggacgggacccccgggcccccagggccagcgggtcctcagggt
cctcctggaagagatggggcagctgggcagccagggcccaaaggagagcagggcaacgtg
ggcgaccttggcctccccggtgcaccaggacccaagggcaacaagggagaaatgggacca
gcaggagccccgggagaaatgggtttagctggccttcctgggcccatcggaccccgaggg
cagccagggccccccggtcccccaggaccaccagggagaggctacgaggctggatttggc
gacatggagggctcggggctgccattcaccgctggctcccctggaccacccggacccgaa
ggaccacagggagtgccaggactgccgggggtgaagggggaggttggcagccctgggcag
cccggcttgccgggactgaagggagacgctggtgtacccggcgtggatggccggcctggc
ctggagggcttccctggaccacagggacccaaaggtgacagaggcagccccggcgagaag
ggcgagcgaggccaagatggtgtggggctgcccgggccccctggtccacctggtccccct
ggacaggtcatcactgtctctagtgaagataagtctttggtggctttgcctggtccagag
ggcagaccaggtcacgccggcttcccgggcccggtgggaccgaaaggcgagcgggggtca
tctggtccccagggctccccggggttgaagggggagaaaggggagcccggcgtcatcatc
agccccgatgggaccgtggtcactgcgaaggtgaaaggagaaaagggggagccggggctg
cggggaccgatgggaccctcgggtccccagggacgagcagggatgaagggagagatcggc
tttccgggcagacccggacgtcctggcatgaatgggctgaagggtgagaagggtgacccc
gtggatgtcagtagcgtactgggcttgcggggtcccccagggcccccaggtcccccaggg
ccccctgggccacctggcagcatagtctacgacagcagcaatgccttcagcgactccagc
catcctgcgctgccagccttccccggtttccaccaatttccaggacaaaagggagagaaa
ggtgatgctggagccccgggacccccaggccacttcccctacgacctgagtcacttcagt
gccagcctgcggggtgacaagggggatgcaggtcccaagggtgagaaaggcgagtcaggc
agcaccccactctacggtcccagcatctctgggctgccagggcctccagggccccagggc
tatcctgggctgccgggtcccaagggggacagtatcgttgggccaccagggcctcccgga
cctcagggcccccctggtgtgggatatgaggggcggcagggcccccctggccctcccggc
ccccctggtccaccctccttcccaggtccccacagacaagctatcagtatccctggaccc
cctggaccaccgggaccccctggaccaccaggcaccagtggaatgtccttggggctgcgg
accctgccgacctaccaggcgatgctgagtgctgcgcatgagctgcccgagggcagcctt
gtcttcctgaccgaccggcaagagctctacgtccgcctgcgtgggggcttccgacgggtg
ctgctggaggagcacaccctgatccccagttcggctctggacaacgaggtgtacgacaag
ccgcccagcatccactatgccggcccccagccccccctccaaccccgcggacccctgcac
cccctccacaaccacagccccccacccaccgcccgaccctggcacggggatgaggtggtg
gccaaccagcaccgcctgcccgagcaacccctgctccaccaccagcacgagctcctcaac
agctactacatccaccgccggccggatccggcccccgtggccgcccacgtgcaccaggac
ttccagcctgctcttcacctggtggccctgaacgccccgctgagcggtggcatgcgcggc
atccggggcgccgatttccagtgcttccagcaagcccggcaggtcgggctggccggcacc
ttccgcgccttcctctcctcccgcctgcaggacctctacagcattgtgcgcagggccgac
cgcgccgccgtgcccattgtcaacctccgggacgaagtgctcttcagtaactgggaagcc
cttttcacgggcagcggggccccactgcgagccggtgcccgcatcctctcctttgacggc
cgggatgtcctgcgggatgtgggatggccgcagaagagcgtctggcacggctcggatgcc
aagggtcggcgcttgcccgagagctactgcgagacgtggcggacagaggaacgtgccgtc
accggccaggcttcctcgctgggctctggcaagctgctggagcagatggccagcagctgc
cagcatgccttcgtcgtcctctgcatcgagaacagcttcatgactgccaccaaaaagtga
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