Harpia harpyja (harpy eagle): 128145167
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Entry
128145167 CDS
T10541
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128145167 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhar03032
]
128145167 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
hhar03400
]
128145167 (TOPBP1)
DNA replication proteins [BR:
hhar03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
128145167 (TOPBP1)
DNA repair and recombination proteins [BR:
hhar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
128145167 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
128145167
NCBI-ProteinID:
XP_052650878
LinkDB
All DBs
Position
1:53941716..53967097
Genome browser
AA seq
1518 aa
AA seq
DB search
MKGSKELFFVKFIKSSGNSEYFFKALESIKEFQSEEHLQILEEETALNIKENDKSLYICD
PFKGVVFNHLKKLGCRIVGPQVVLYCMQSQQCVPRAECPVYNMTMADVTVSCTSLEKDVR
EEVHKYVQMMGGCVSRDLSVSVTHLIAGEVGSRKYLVAASLKKPVLLPSWVKTLWDKSQQ
SIMRYTDVNMEDYACPVFLGCTICVTGLSSSERKEVQRLTAEHGGQYTGRLKMNECTHLI
VQEPKGQKYECARKWNVHCVSVQWFSDSIAKGFCQDETIYKIESGSKLSNIPNMSTPTNH
ASKPDNHTFSDVSHISNINSSSVNETARSSAMSSRLDPLPDELENLDISSFQDPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENNDELKHFLDKTAHRPHV
VTAKWLLESFSKGYLHPVEQYIPLNYQLLENPILEQPGMKSILPQNNNLLKKEAVNVTKH
RKAAEEDFLSQYINNDSTLDEVEKLTSRTFSDVTHLTVQGENQSSACNGSLGESSALAEG
GLFVRKRFLLLGFGEEDESCIADIIKENAGKILPLQSRTIADYAVVPLLGCTVKPTVGDV
VTNTWLMTCVEQQLLLDPQSNPLFTPVPVMEGVTPLEDCVLSFSQFTVAERDSLVYLAGL
LGARVQEFFVWKANAKKGMFATTHLVAREPDGSKYEVAKKCNLPAVTVDWLLQSARTGKR
ADESKFLVENAEAEDKESSITQLSKTPATVKSSDSEQPTYLLEAGKKPPMTPLDINRFQS
KAFQAVISHHIGKTTPLTHGGLPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GGPDQKTRKLSTPLSEVISRNLKLALANSARHTVALTASPQLTTAEPEVEEEPKPLADVV
IYVSKKLSKKQSELNAVAASLGADYRWCLDETVTHFIYKGRQNDNNKEYKYVKERGIHIV
SEHWLLESAQEYKRLPESLFPHTYNPKMSLDISAVQDVRLSSSKLSSTGKPAEENEIIPV
DEDDAEDDVTTDQIKETVTTREEHIVTSESKGVLTQALEMRENFQRQLQEIMSATSLVKP
QGQRGSLSRNSFDGSPTTPDSTWSVRNGRSRVLEALRQSRQAVTDINTEPSQNEQIIWDD
PTAREERARLVSNFQWPNSPSQYTEQGQNNANKNLDESAFKGSLADAEIADIAVPEAGDG
DLIEGLKNPVRRDPETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKAVTEDEKADEERE
KHRKFQLSSLNPQERFDYCHLIEELGGIVLEKQCFDPTCTHIVVGHPLRNEKFLASMAAG
KWVLHRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHKGR
QETGIVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSVSLFKEATHLFADFSKL
KPEDTRVDVAEAAAQGVNCLKPEYIADYLIQDPPPPMESYCLPQAESCLQNNTERGTGLS
QKRKALGEMCGVKRSRIH
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagtaaggagctgttttttgtgaaattcataaagtcttctgggaactcggag
tatttttttaaagctcttgagtctataaaagaatttcagtcagaagagcatctccagatc
cttgaagaagaaacggcactcaatataaaagaaaatgataaatcgctttacatttgtgat
ccttttaaaggcgttgttttcaatcatctcaaaaagcttggctgtagaattgttggacca
caggtagtcctgtactgtatgcagtcccagcaatgtgtcccaagagctgagtgtcctgtg
tacaatatgaccatggccgacgtaacagtatcctgtaccagccttgaaaaagatgttagg
gaagaagttcataagtatgtacagatgatgggtggatgtgtgtccagagacctcagtgtg
tcagtaactcatcttatagctggggaagttggcagcaggaaatacttagtagctgcttct
ctgaaaaaacctgttttgcttccctcttgggttaagacactgtgggataagtctcagcaa
agcataatgagatacactgatgttaacatggaagactatgcttgtcctgtgttccttggc
tgtacgatttgcgtaactggcttaagtagttcagaaaggaaagaagtccagcgcctcact
gctgaacatggtgggcaatatacggggcggctcaagatgaatgaatgtactcacctcata
gttcaagaaccaaaaggtcagaagtatgaatgtgccagaaaatggaatgtgcactgtgtg
tctgtgcagtggttttctgacagcattgcaaaaggcttctgtcaggatgagacaatatat
aaaatagagagtggatcaaaactgagtaatatacccaatatgtcaacacctacgaatcat
gccagcaagcctgacaatcataccttttcggacgtcagccacatttctaatatcaattca
agtagtgttaatgaaaccgcacgtagttctgctatgagcagcagactggatcctcttcct
gatgagctggaaaacttggatataagttcttttcaagaccctgaagatttgttagatggg
tgtcgaatttatctgtgtggcttcagtggcaggaagttggacaagatgagaaggcttatt
aattgcggtggtggtgttcgatttaatcaactgaacgaagatgttacccatgtcattttg
ggggaaaacaatgatgagctgaaacactttttggacaagacagctcacaggcctcatgta
gtaacagcaaaatggttgctggagtcatttagtaaaggttatctacatccagtggagcaa
tatatccctctgaactaccagctgttagagaacccaattttggagcaacctggaatgaag
tcaattcttccccaaaataacaatcttttgaagaaagaagctgtgaacgttacaaagcac
cggaaggctgctgaagaggacttcctctctcaatacataaataatgattctacattggat
gaagttgaaaaactgacatccagaaccttcagtgatgttactcacttgactgttcaggga
gagaatcaatcttcggcctgtaatggttctttgggagagtcttctgcactggctgaagga
ggcttatttgttagaaagagatttcttcttttgggttttggtgaagaggacgagtcctgc
attgcagatattataaaggagaacgctgggaaaattctgccgctgcagagcagaaccatt
gcagactatgctgtggtacctttattggggtgcacagtgaagccgactgttggtgatgtt
gtcacaaatacgtggctgatgacatgtgtggaacagcagctccttttagatccccagtcc
aatccacttttcacaccagttccggtaatggaaggagttacccctctggaagactgtgtt
ctttcttttagccagttcactgttgcagagagagactccctggtttatctggcaggactg
ctaggagccagagtccaagaattctttgtgtggaaagccaatgcaaaaaagggaatgttt
gccactacccatcttgtggcgagagaaccagatggctccaagtatgaagttgcgaagaag
tgtaatttgccagcagtcactgtagattggcttttgcagtctgcaaggacaggaaagaga
gcagatgaaagcaagttcttggttgaaaatgcagaggctgaagataaggagagttccatt
actcagcttagcaagacaccagcaacggttaaatcttctgattcagaacaacctacttat
ctccttgaagctggaaaaaaaccacccatgacccctcttgatatcaacaggttccagagt
aaagctttccaagctgtaatctctcatcatattgggaagacaaccccccttacacatggg
ggactgccacagaaagaaccatctttacatcttgatacaccgtcaaaatttctttccaaa
gacaagttattcaagccgtcttttgatgtaaaggatgctctggcagctttggaaactcca
ggaggtcctgatcaaaaaaccaggaaactgagcacacctctttctgaagtcatcagcaga
aatttgaaattggcattggcaaacagcgcaaggcatacagtagctcttactgccagccct
cagttgaccactgcagagccagaagtggaagaagagcccaagcctctggccgatgttgtt
atatatgttagtaaaaaacttagtaagaagcaaagtgaactgaatgcagtagcagcttct
cttggggcagactacagatggtgccttgatgaaacagtaacacacttcatttacaaagga
cgacaaaatgacaacaataaggagtacaaatatgttaaagaacggggtatacatattgtt
tcagaacactggcttttagagagtgcccaagaatataaacggcttcctgaatctctcttt
cctcacacttacaatcccaaaatgagcctggacatcagtgcagtgcaagacgtcaggctc
tcctccagtaaactttcgtcaactggaaaaccagcagaggaaaatgagattattccagtg
gatgaagatgatgctgaagatgatgtaactaccgaccaaataaaggaaacagttactaca
agggaagaacatattgtaacaagtgaatccaaaggagttttaacccaagcactagaaatg
agggagaacttccagaggcagctgcaggagatcatgtctgccacatcgctagtgaaacca
caagggcaaagaggatccctttcaaggaacagttttgatggttctccaaccactcctgat
agcacatggtctgtgcgaaatggccgcagtagggtcttggaagctctaaggcagtcccgt
caggcagttacagatataaacacagagccatcccagaatgagcagatcatctgggatgat
cctactgcgagggaggagagagcaagacttgtcagcaactttcagtggcctaatagtcct
tcccagtacactgagcaaggtcagaataacgccaataagaacctggacgagtctgccttc
aaaggatctttagctgatgcagagattgctgatatagctgttcccgaggctggggatgga
gatttgattgaaggtctaaagaatcctgtacgtagagatcctgaaacaccaattaaagat
cacttgattcccactccgcaggcccccagcattgctttcccactggctaaccctcctgtg
gcaccacagcccaaagaaaaggctgttacagaagatgagaaggctgatgaagaacgagaa
aaacaccgtaaatttcagctgtcttctcttaatcctcaagaaagatttgattactgccat
ctgattgaggaattaggtggaatagtacttgagaaacagtgctttgatccaacttgcaca
cacattgttgtgggacatcctcttcgaaatgaaaaattcttggcttcgatggcagctgga
aagtgggtgcttcatcgttcctacctggaggcatgtagaggagctggctgctttgttcag
gaagaagattacgagtggggaagtaattccatacttaatgttttgcctggaatcaatgta
aaccagaagaaactagcacttgcagccatgaggtggaggaaaaaaattcataaagggagg
caagaaactggaattgttgagggagctttcagtggctggaaagtgatcctaaatgttgat
caaaccaaggaagcgggattcaggcgccttcttcagtcaggaggagcaaaagtgttttct
ggtcattctgtgtctctcttcaaagaagcgactcatctctttgctgacttcagtaagctg
aagccagaggataccagggttgacgtggcagaggcagcagcccaaggagtgaactgcctg
aaaccggagtacattgccgactacctcatccaggatccacctcccccaatggagtcttac
tgcctgccgcaagctgaatcttgccttcagaataacacagaacgtggaactggattatcc
cagaaaagaaaagcactgggagaaatgtgtggagtcaagcgatccagaatacactga
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integrated database retrieval system
