Harpia harpyja (harpy eagle): 128146806
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Entry
128146806 CDS
T10541
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128146806 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhar03019
]
128146806 (EXOSC1)
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128146806 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128146806 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
128146806
NCBI-ProteinID:
XP_052654570
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All DBs
Position
10:30573791..30576362
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AA seq
195 aa
AA seq
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MAPPARYCVPGERLCSTEEATAGSGTYTRHGFIFSSLAGCLEKRSEDSGLPVVSVVRDAE
SQLLPDVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
DFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccgctcggtactgcgtccctggcgagcggttgtgcagcacggaggaggcc
acggcgggcagtgggacttacacccggcacggcttcatcttctcctcgctggctggctgc
ctggagaagaggagcgaggacagcgggctgcccgtcgtgtcggtggtgagagacgccgag
tcccagctcctgcccgacgtgggggccgtggtgacctgcaaggtttgcagcattaactcc
cgctttgccaaggtgcacatcctgtatgtcggctccacgccactgaaatccacctttcgg
gggaccatacggagagaagatattcgagccacggagaaagataaggtagaggtgtacaag
agtttccgccccggtgacatagtcctggccaaagttatctccctgggggacgcacagtcc
aactacctgctgagcacggcggagaacgagctgggcgtagtggtggcacgcagcgaggca
ggggtgcagatggtgcccatcagctggtgcgagatgcagtgcccgcggacacacaccaag
gacttccgtaaggtggcccgggtgcagccccagttcctgcagacctag
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