Harpia harpyja (harpy eagle): 128146896
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Entry
128146896 CDS
T10541
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128146896 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhar04990
]
128146896 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
hhar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128146896 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
128146896
NCBI-ProteinID:
XP_052654789
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All DBs
Position
10:15188110..15316995
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AA seq
751 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIEGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKVITNTAANKEFTE
RFNPNALKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGGE
FASSLPIKDPHIDSASPVYQAVLKTQNKPEDETEDWGRRSANLQSKSFRILAQMTGTEYM
QDPDEEALRRSRDKENVSAASENRPTATPHAPQYVTSSTWHPPKSCTMDANTDNAKPVAF
KGSVRLGAGTSQREASFVTTGQKVPLTSSSKQSTPVEHAPVSTSSASAPAPHASAHQPAS
AAQNTASLMTPPATTSVVQESFSSSFQRVLAAPSSLSQPKPFHGSKNMSVAASTISSAIS
SQSSFNRHSSTSVSYQSKKRNTSQSYTPMPVSGSYGESPAASATSKLRVVTTASIKPSVY
QPAPAPVHSYTPANAEPASRPPWVTDEAFSQKFAPGKTTTTVTKHILPRGAPIPSPASTS
AYPSPVSTSSQAPAIARGTVQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFN
CAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTSCFVC
AACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFI
CAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagcgtgactctgaatggacctggaccatggggtttccgactgcaagggggc
aaggacttcaacatgcccttgaccatctccagaatcactcctggcagcaaggcagcacag
tcacagatgaaccaaggggaccttgtcgtagccattgagggagtcaacactgacagcatg
acccacttagaggcccagaacaagatcaagtcagcgagccacaacttgagcctcactctt
cagaaatctaaacgtccagtgccagtttcaaccacagcacccagaattgactctcccagg
gctgtaattccccaccagaaggtcataaccaacaccgctgccaacaaggagttcacggag
cgtttcaaccccaatgccctgaaggactctgccctgtctacacacaaacccattgaggtg
aaaggcctaggcggcaaggctactataattcacgcccagtataacaccccaatcagcatg
tattcccaagatgctatcatggatgcaattgcaggccaggcacaagcccagggtggagaa
tttgctagtagccttcctattaaagatcctcacatagacagtgcctctccggtgtatcag
gctgtgcttaaaactcagaacaagcctgaagatgaaaccgaagactggggtcgccgttct
gccaatctgcagtctaagtctttccgcatccttgcccagatgactggaacggagtacatg
caagatccagatgaagaagccctgaggaggtcaagagacaaggaaaatgtttctgcagca
tcagaaaacaggcctacagctactccgcatgcgccacagtatgtgacctcaagtacttgg
catcctcctaaatcatgcaccatggatgccaacactgacaatgctaagccagtggctttc
aaggggtctgtgaggcttggagcgggtacaagtcagagggaggccagtttcgtcactact
ggccagaaagtccctcttacttcatccagtaaacaaagtacccctgtcgagcatgcgccg
gtgtctaccagttctgcctctgctcctgcaccacatgcttcagcacatcagcctgcttct
gctgctcaaaatacagccagtctgatgacaccaccagcaaccacctcagtagtgcaagag
tctttctcatcctccttccaaagagtgcttgcagcccccagctctctttcacagcctaag
cctttccatgggtccaagaacatgtcagtagcagcctccactatttcatctgctatctca
tctcagtctagtttcaaccggcattcttccacctccgtcagctaccagtcaaagaagaga
aacacaagccagtcatatacaccaatgccagtttctggaagctatggtgaaagtcctgct
gcttctgctacttcaaaactgagagttgttactactgccagcataaagccctccgtctac
cagccagcaccagcaccagttcattcctacacccctgccaacgctgagcctgcaagtcgc
cctccctgggtaacagatgaagccttttcccagaaatttgcacctggaaaaaccaccacc
actgtcacaaagcacatcctaccaaggggtgctccaataccatctcctgcctcaacttcg
gcttacccatctccagtttcaacttcttcccaggctcctgcaatagcccggggaacagtt
caaagggctgagcgttttccagccagcagccgaactcctctctgtgggcactgcaacagc
ataattcggggtcctttcctggtagccatgggtcgctcttggcacccagaagaattcaat
tgtgcttactgcaagacatccttggctgatatgtgctttgtggaagagcagaatagtgtg
tactgtgagcgctgttatgaacagttctttgcaccaacctgtgccagatgccacactaag
attatgggggaagtgatgcacgccctaagacagacttggcacacaagttgctttgtctgt
gctgcttgtaagaagccatttgggaatagcctctttcacatggaggatggggaaccttac
tgtgagaaagattatattgctttgttcagcacaaaatgccatggctgtgattttcctgtt
gaagctggagataaattcattgaagctcttggacacacttggcatgacacctgcttcatt
tgtgctgtatgccatgtgaatttggaaggtcagccattctactccaagaaggataagcca
ctgtgcaagaagcatgcccatgccatcaatgtttaa
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