Harpia harpyja (harpy eagle): 128147692
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Entry
128147692 CDS
T10541
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128147692 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhar03019
]
128147692 (SMG7)
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128147692 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
128147692 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
128147692
NCBI-ProteinID:
XP_052656505
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All DBs
Position
11:12016383..12072117
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AA seq
1173 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSKG
HQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSE
AKESLALQETSVADPLSTDGSPGLKSVLSSGRSLNNNCDAGEKPMVTFKENIKPREINRE
QGRIYPGKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVK
SQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVA
FSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQT
PPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQYPQT
DSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPM
EPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEDP
KSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMS
QSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPW
SPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRW
KTDKPAIGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWS
SSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaagctgggtccagcagaagtctggacatccagacaggctctacaggac
ttatatcagaaaatgctagtgaccgatttggaatatgctttagataaaaaagtggagcag
gacctttggaatcatgcctttaaaaatcagatcacgacgctacagggtcaggcgaaaaat
agagcaaatccaaatcggagtgaagttcaggcgaacctttctctgttcttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgcca
tgtcgtgtaaagtcttcccagctgggaatcattagcaataaacagatgcacaccagcgcc
atagtgaagccgcaatctagctcctgctcttacatctgccagcactgccttgtccacctt
ggagatattgctcgctataggaatcagaccagccaggcagagtcttactacagacatgca
gctcagcttgtcccttctaatggtcagccttataatcaattggctattctagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcct
ttcccagctgcctccactaacctacagaaagcactttctaaagcactggaaagtcgtgat
gaggtgaagactcgatggagtgtgtctgacttcatcaaggcatttattaaattccatggc
catgtgtacctgagtaagagcttggagaagctgagcccacttcgagaaaagctggaagaa
cagttcaagaggttgttattccaaaaggccttcaattctcagcagttagtacatattact
gttatcaatctgtttcaactacaccacctgcgagacttcagcaatgaaacagagcagcac
agctacagccaggatgagcagctctgctggacacagttactggctctcttcatgtccttt
cttggagttctgtgcaagtgtcctttacaaaatgactaccaggaagactctggggctgca
tatcctcttccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgttttc
caggaggcagtggttgatgaaagacgcatatggccctggctgatttctcttctaaacagc
ttccagcctcatgaggaagatctatccaataataatgcaaccccccttccagaagaattt
gagttgcaaggattcttggctctgaggccttcattcaggaacttggatttttctaaaggc
caccaggcaattacaggagataaggaagggcaacaacgtcggatacggcaacagcgtctg
atcttcacaggcaaatggattgctgataaccagccgaggttgattcagtgtgaaaatgag
gtaggaaaactgttgtttttgacagaaatcccagaactattactagaggaccctagtgaa
gccaaagagagtctcgccttgcaggaaacatctgttgcagacccgctatctacagatggg
agccctggactcaaatcagttctgtcctctggcagaagcctgaacaacaactgtgatgca
ggagaaaaaccaatggtcacgttcaaagagaacatcaagccacgggaaattaacagagag
caagggcgaatctatcccggtaaagatgtaggtagggaaagacgggactatagcaaagga
atagtagccaataagaatgatggaaagaaggacaacaataaaagaaagaatgagaccaag
aagtgcggcttggataagatgcaggaagcaggaaagcagaacgtggcagttcaggtgaaa
tcccagacagagatgaggaagactccagtgtctgaagccaggaaaacacctgtaactcag
actccaagtcaggccagcagttctcagttcatccccattcatcacccaggagccttccct
ccccttcctagccggccagggtttccacctccaacctacgttgtcccccctcctgtggct
ttctccatgagcacggggtacaccttcccaggtggtgtttctgtcccaggaaccttcctc
cagcccacagctcactcacctgcaggaaaccaggtgcaaggtgggaaacagtcccacatt
ccttacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaaca
ccacctccttcccagcaacctctctcatctttaccagctcaggcaacagcacagtctgca
agccagttacaggtccaagctctggcccagcaacagcaacaacagtcccctacgaaagct
gtgcagggcctggggaagagcccgccacaccactccggattccagcagtatccgcagaca
gactcgtcaaagcagctctggaacccacctcaagtccaaggctcactggggaagatcatg
cctgtaaagcagtcctactatctgcaggcccaggaccctctaaaattatttgaacagtca
ttacagcctcccgtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatg
gagccatataaccagaacccctcagaagtcaaggtgccagaatattactgggactcttcc
tatggcatggctgacaatagggtgatggcacagcagtctaacatggaccgcaggggaaaa
cggcaaggagtcttccgcccagagcaggatgccgtctccaggatgacctttgaggacccc
aagagctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggag
gaagagctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcc
tctcttcctggacgaagcctatttaagtccctgctggaaaaaccatcagaattgatgtct
cagtcgtcgtctttcctgtccctcagtggcttttctcttaatcaggaaagatatccaaat
aacagcatgttcaatgaggtatatgggaaaaacatgaataccagcacaaaaacagaggtc
accccttcagttgctcatcaggagacttcactatattctctctttgaggggactccgtgg
tctccatcccttccagccagctcagatcattcgacaccagccagccagtctcctcactcc
tccaatcccagcagcttgccaagctcccctccaacccataaccacaattctgttcccttc
tccaacttcggacctattgggactccagacaacagagacaggagagttgcagaccgctgg
aaaacagataagccagcgataggagggtttggtctggactatctcccagcaacatcatca
tcttcagagagcagctggcaccagtccagtgctcccagtggcacctgggcagcccaaggc
cctcctgctatggaggactcctcagctgtgcttatggagagcctgaagtccatctggtct
agttccatgatgcatcctggaccctcagccctggagcagctgttaatgcagcagaagcag
aagcagcaacgcggacaaggcaccatgaacccgccgcattga
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integrated database retrieval system
