Harpia harpyja (harpy eagle): 128147745
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Entry
128147745 CDS
T10541
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hhar Harpia harpyja (harpy eagle)
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhar03019
]
128147745 (PTBP1)
03041 Spliceosome [BR:
hhar03041
]
128147745 (PTBP1)
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128147745 (PTBP1)
Spliceosome [BR:
hhar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128147745 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
128147745
NCBI-ProteinID:
XP_052656667
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All DBs
Position
11:617409..648898
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AA seq
557 aa
AA seq
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MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSSSAANGNDSKKFKGDSRSAGVPSRV
IHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPV
LRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAP
GIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRITIPGLTGA
GNSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHL
NGQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcggggatctgacgagcttttc
tctacttgtgttactaacggaccctttatcatgagcagcaactcttcttctgcagctaat
ggaaacgacagcaaaaaattcaaaggcgatagtagaagtgctggggtcccatcccgagta
atccacgtccgtaaactccccagtgacgtcacagaggcagaagtcatttctttgggctta
ccttttggcaaggtcaccaatcttctaatgttgaaaggaaaaaatcaggctttcatagaa
atgaatacagaggaggcagccaacaccatggtaaactactacaccacagtcactccagtc
cttcgaagccagcccatctatattcagttctccaaccacaaggagcttaagacagacaac
tctccaaaccaagcacgtgcccaagcagctctgcaagcagtgaattctgttcagtctgga
aacctagcgctgtcagcctcagctgcagcagtagatgcaggaatggcaatggctggccag
agccctgtcctgaggattattgttgagaacctcttctatcctgtcactctagatgttctg
catcagattttttccaaatttggtacagtcttgaaaataattacgttcacgaagaacaac
caatttcaggccctgttacaatatgctgaccctgtgagtgctcagcatgccaaactgtct
ttagatggacagaatatctacaatgcctgttgtacgctgcgcatagatttctcaaagctc
acaagtctcaatgtaaaatacaataatgataagagcagagattatacacgaccagaccta
ccttctggggataaccagccctctcttgatcagaccatggcagctgcttttggtgcccca
ggaataatctctgcttctccatatgcaggagctggctttcctcctacctttgcaattcct
caggctgcaggcctgtcagttccaaatgttcatggagcactagctcctttggctatccca
tcagcagcagctgcagcggctgcagcaggacggattaccattcccggcctcactggggca
gggaactctgttctgctggttagcaatctgaaccctgagagagttacaccccaatgcctc
tttattcttttcggagtctatggtgatgtgcagagggtgaagattttgtttaataagaaa
gagaatgccctagttcagatggctgatggaaaccaggcccagcttgccatgagccattta
aatggtcagaagcttcatgggaagccaatccgtataacattgtccaagcatcagacagta
caacttccccgcgagggacaggaagaccagggtctgactaaggactatggaaattctcct
ctacatcgtttcaagaaaccaggctccaaaaatttccaaaacatctttcccccttctgcc
actcttcatctgtccaatatcccaccttcaataactgaagaagaccttaagatgttattt
tcaagcaacggtgggatggtcaaaggattcaaattcttccagaaggaccgtaaaatggct
ctgatccagatgggctctgtggaagaagccattcaatcactcattgacctccataatcat
gacctgggtgagaatcatcacctgcgtgtgtccttctcgaagtccaccatttaa
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