Harpia harpyja (harpy eagle): 128147990 Help Entry 128147990         CDS       T10541                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism hhar  Harpia harpyja (harpy eagle) Brite KEGG Orthology (KO) [BR:hhar00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:hhar03000]     128147990 (RC3H1)    04121 Ubiquitin system [BR:hhar04121]     128147990 (RC3H1) Transcription factors [BR:hhar03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     128147990 (RC3H1) Ubiquitin system [BR:hhar04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     128147990 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Serpin Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-CCCH zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 zf_CCCH_4 FYVE zf-CCCH_4 Baculo_IE-1 PaaA_PaaC Vesi_VP2 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  128147990 NCBI-ProteinID:  XP_052657281 LinkDB All DBs Position 11:11663333..11746984 Genome browser AA seq 1534 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLL ESVPKSSISALPVNPHPVPTRAPTDLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY PPMGQPIYPPHYDSRRVYTPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG YCPVAPHLSQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE EVFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANV DSKAMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQG ATTKSIISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKPLPSAERE QQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQ LSLELHQVEREIGKRTRELSMESQSSLDIKTKLGTTKQTENGQLEPQSKVPAEDLALTFR TMHLFVVCLFSVWGLAAPEHYIVEDVCTAKPRDIPVNPICIYRNPEKKPQEGEGQEPGKG KLPESTNPRVWELSKANSRFAVVFYKYLADSKDNGENIFMSPLSISTAFAMTKLGACGST LQQLMEVFRFDTISEKTSDQIHFFFAKLNCRLYKKANKSSELVSANRLFGEKSLVFNETY QNISEIVYGAKLWPLNFKEKPEFSRKIINAWVANKTEKRITEVIPERGIDDLTVLVLVNT IYFKGHWKSQFPAPNTKLDLFHKANGETCKVPIMYQESKFHHASIPQDKVQVLELPYKGD DITMVLVLPNAGTPLVEVERDLTSEKLQDWIDSMMEVSLFVYLPRFRVEDSFSVKEKLRK MGLEDLFSPENARLPGIIAEGRTDLYVSEAFHKAFLEVNEEGSEASAATAVTVSGRSFPM NRIIFNANRPFLLFIREASLNTIIFMGRIADPCS NT seq 4605 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact ttcgacgaaacaatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac attgaactccttcctgtgaactcagccttgctgcaactagtgggtgctcaggttcctgag cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag aaatgtgtggaagaattagcgttgtacctcaaaccactcagcagcgcgagaggtgtgggt cttaacagtactactcagagtgtgctaagtcgtcccatgcaaaggaaacttgtgacatta gttcattgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcacggtca cttggtgaaagaacagtcacagagctcattcttcagcatcaaaatcctcagcagctctct tccaacctctgggctgcagtgagagctagagggtgccagttccttggaccagcaatgcaa gaggaggctttaaaactggttctactggcgctggaagatggatctgctttgtcacgaaag gttttggttctctttgtggttcagaggctggagccgcgatttcctcaggcttctaaaact agcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtgacaaagcga gatgaggattcctccctgatgcaactgaaggaggaatttcggacttacgaagctttgaga agggaacatgattcacagatagttcaaatagctatggaagcaggtttacgcattgcacca gatcagtggtcctcactgttatacggagaccagtctcacaaatcccacatgcagtctatc attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattaactattgct cttcagaggactggagatccagctaacctgaatcgtcttcgacctcacttagagctgctg gcaaatattgatcccagtccagatgctccacctccgacgtgggaacaactggaaaatgga ctagttgctgtgagaactgtagttcatggcttagttgattatatccagaatcacagcaag aaaggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagt gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcggaggaa gggggagtggacttgcccaataggaaaacatctgctctgccaaatggaattgtgtcaaca ggcagcacagtgacgcaacttatttctcgagggactgactccggttacgaaactgctctg aagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgctg gaatctgtccccaagagctctatttctgccttaccagtgaaccctcatcccgtgcccact cgggcaccaacagatctgccttcagtgtctgtcaccaagcagttgcaaatggtaccacga gggtctcagttgtataatactcagcaagcagatatgttttatcaagatcctagaggagct gccccaccatttgagccagcaccctaccaacaaggagtttactatcccactcagtccatg tctcggtttgtccgacctcctccatcagctcctgaacctggtccaccttatttagaccat tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccacagcagtat cctcctatgggacaacccatatacccaccacactatgacagccgtcgtgtatatacccct gtccagccatatcagcgagaggagattgtccgaggaagccctgtacccattgaaattcca caagctgctgtaccttcctacgtacctgaatccagagacagataccagcaaacagaaggt tattgcccagtggctccccacctcagtcagatcagaccttcatgccacaggcctcatccc agcctggatgaacttcaccgacgaaggaaagagatcatggcccagctagaagagaggaag gtgatttctccacctccttttgcaccatcaccaaccttgcctcatccatttcattcagag gaggtttttgtttttgtacagtacttggatgaagacctgaaggtagctgggaaatacaaa ggaaatgactacagccagtactctccctggtcctgtgacaccatcggctcctacattgga accaaagatgcaaaacccaaagatgttgtggcagcaaggagtgtggagatggcgaatgta gatagtaaagccatgcgtgaccagcgattagacatgcagcgaagagcagcagagactggt gatgatgacctcattccatttggagaccgaccaactgtgtcaagatttggggctatctcc cgtacttccaaagcgatgtaccagaattccggtcccatgcaggccatggcggttcaggga gctaccaccaaatcaatcatttcagactacaatccttatggaactcacggtggctgggga ggctctccatattctcctcatcaaaatataccttctcagggacgtttcaatgacagggag agactgtccatgtcagatgtggctggtcatgggaaaccgttgccctcagctgaacgagag cagcaactgcgcatggagctgcagcaagtagaccatcagattagccagcagacacaaatg cgaggactagaggctgttagtaacaggctgctgttgcagagggaggcgactaccctggca ggccaaccacagcccccacccccacctcccaagtggcctgggatgatctcaagtgaacag ctgagcttggagctacaccaggtggaaagggaaattgggaagagaacccgtgagctgagc atggagagccagtcttcactggatataaaaaccaaactgggcaccactaaacagacagaa aatggacaattagaaccacaaagcaaggttccagctgaggacctcgcactgacattcagg acaatgcatctttttgtggtgtgtctcttcagtgtctggggtctggctgcccctgagcac tacattgtggaagacgtctgcactgcaaagccacgcgacatcccggtgaatcccatctgc atctatcgcaaccccgagaagaagccccaggagggcgaggggcaagagccagggaagggc aagctcccagagtctactaacccccgggtctgggagctgtcaaaggccaattctcgcttt gctgttgtcttctacaagtacctggctgactctaaggacaacggagaaaacatcttcatg tcacccctcagcatttctacagccttcgccatgaccaagctcggagcttgtggtagcacc ctccagcagctcatggaggtctttcgatttgacaccatttcggaaaagacatctgatcag atccacttcttctttgccaagctgaactgccggctttacaagaaagccaacaaatcctca gagctggtatcggccaaccgcctcttcggggagaaatctttggtctttaatgagacttac cagaacattagtgaaatagtttatggagcgaaactctggcccttgaacttcaaagagaag ccagaattttccaggaagatcattaatgcgtgggtagctaacaagacagagaagcgcatt acagaagtgatcccagaaagaggtattgatgatctcactgtcttggtcctggtcaacacc atttattttaaggggcactggaaatcgcagttcccagctccaaacacaaaactggattta tttcataaagccaatggtgagacctgcaaagtcccaattatgtaccaggagtccaaattc caccacgcatccatcccccaggacaaagtccaggtgctggagctgccttacaaaggggac gatatcacaatggtgctggtcctgcccaatgctgggacgccattggtggaggtggagcga gacctgacatcggagaagctgcaggactggatagactccatgatggaggtatctctcttt gtctacctccctcgcttccgcgtcgaggacagcttcagtgtcaaggagaagctgagaaaa atggggctggaagatctcttcagtccagaaaatgccagactcccaggtatcattgcagag ggtcgtacagatctgtacgtatctgaggctttccacaaagccttccttgaggtgaatgaa gaaggcagcgaggcatcagctgctacagctgtcaccgtctctggccgttccttccccatg aacagaataatcttcaatgccaacaggcccttcctgcttttcatccgggaagcctccctc aacaccattatctttatgggcagaatagccgacccttgctcctaa

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