Harpia harpyja (harpy eagle): 128150172
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Entry
128150172 CDS
T10541
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128150172 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhar03400
]
128150172 (MSH2)
DNA repair and recombination proteins [BR:
hhar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128150172 (MSH2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
128150172
NCBI-ProteinID:
XP_052662101
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Position
13:complement(4410524..4466743)
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AA seq
936 aa
AA seq
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MAVEPPREVVWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTAHGADARLAARELF
RTRAVIRQLAGAPGTQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDW
YLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTTDGQRVVGVGYVDATLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDI
VQDLNRLLKSKKEEQMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLS
QYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIE
ERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPSV
VEALEKHEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPN
LTELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNS
KYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMND
VIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITF
EKGKQMFHIITGPNMGGKSTYIRQTGVIILMAQIGCFVPCDSAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAF
CMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFP
KHVIESAREKALELEEFQNIGKSKESEGEPPAKKFYREREEGEKIIQDFLCKVKALPLTD
MSEDDIKIKLKHLRNDVLVKNNSFVNEIISRTKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagccgccgcgggaggtggtgtggccggagggcgcgggggccgaggcgggc
ttcgtgcgcgccgtcctctcgctgcccgagaagcccgacaccaccgtgcgcttcttcgag
cgcggcgactactacacggcgcacggcgcggacgcgcggctggcggcccgcgagctcttc
cgcacccgcgccgtcatccgccagctggcgggggcaccgggaactcagaagcttgagagt
gttgtgcttagtaaaatgaactttgaatcttttgtgagagatctgcttctggttcgtcat
tacagagttgaagtttacaagaacaaagcagggagtaaatctatcaaagaaaatgactgg
tatttagcatacaagggttctccaggaaatcttgcccagtttgaggaagttctctttgcc
aacaatgacatgtcaacagccattggggttgtgggtgttaagctgtctactactgatgga
caaagagtggtaggagtggggtatgtcgatgctacgctgagaaaattgagtgtctgtgag
tttccagataatgatcagttctcaaaccttgaagctctactggttcaactaggaccgaag
gagtgtgtgctaccaggaggagagactgcaggagaaatgggaaaactacgacaagtcatt
cagaggggaggaatcctgattacagacaggaagaaggcggatttcacaacaaaagatatt
gttcaggatctcaatcgcttgttaaaatcaaaaaaagaagaacaaatgaatagcgcagca
ttaccagagatggaaaagcaggttgctgtttcatctttgtcggccattatcaagttttta
gagttgctgtcagatgaatctaattttggacaatttgaactgactacttttgatcttagt
caatatatggttctagataatgcagctgttcaagccctcaacctttttcagagttctgtg
gaaaatgctaatactgcacagtctctagctggtttactaaataaatgcagaacccctcaa
ggacaaagactagttaatcagtggatcaaacaaccacttatggacaagaatagaattgaa
gaaaggttgaatttggtggaagcttttgtggtggatccagaactacgtcagtgccttcaa
gaagatctcttacgtcgcttcccagatcttaaccggctggcaaagaaatttcagagacaa
gcagcaaacttacaggactgttaccgaatgtatcaggcaattaatcaactgcctagtgtt
gtagaagcactagaaaaacatgaaggagctcaccagatgttgttgttggcagtgtttata
acacctcttaatgatatctactctgacttctcaaagtttctggagatgatagaaacaaca
ttggacatggataaggtggagaatcatgaatttcttgtcaaggcttcttttgaccctaat
ttgacagaattaagagaaaagatgaatgaactggaagaaaaaatgcagtcctttttaaag
agtgcagccaaagaactaggtttggaagctggcaaaagtatcaaactggagacaaattca
cagtttggacatcactttcgaataacttgcaaggaggaaaaagttctccgtaacaattca
aaatatggaatagtcgatacacagaagaatggtgtgaaatttactaacagcaaactgagc
tccgtcaatgacgaatatataaagaacagagaagagtatgaagaggctcaggatgcaatt
gtcaaggaaatcattaacattgcttcaggttatgcagaaccaatacagacgatgaatgat
gtgatagctcaattagatgcaattgtcagttttgctcatgtgtcaaacggagcaccagtg
ccgtatgtccgtcctgtcattctggaaaagggacaaggaaggattgtgctgaaaggtgcc
aggcatccttgcattgaagtgcaagatgaggtggccttcatccccaatgacattacattt
gagaagggcaagcagatgttccacattattactggccctaacatggggggaaaatcaacc
tacattcgacagacaggggtgattattcttatggcccaaattgggtgttttgtaccatgc
gactctgcagaaataaccattgtggattgtatcctggctcgggtgggagctggagacagt
cagctgaaaggcgtgtctactttcatggctgaaatgttagaaactgcttcaatccttagg
acagcatctgaaaactccctgataatcatcgatgagctgggaagaggaacttctacctat
gatggttttggcttagcatgggctatttcagaatacattgctagcaaaatctgtgctttc
tgtatgtttgctacacattttcatgaactgacagctcttgctgaccaagtgccaacagta
aataacctacatgttactgctctgaccagtgatgacacactgacgatgctttatcgtgtc
aaggaaggtgtttgtgaccagagttttggaatacacgtagctgagttggcagctttccca
aaacatgtgatagaaagtgcgagagagaaagcattggaattggaggaatttcaaaacatt
ggcaagtccaaggaatctgaaggagaaccaccagccaagaaattctacagagaaagagag
gaaggtgaaaagataattcaggattttctttgtaaagtgaaagcattgcccctgacagac
atgtcagaagacgatatcaaaatcaagctgaaacatctgagaaatgatgtgttggtgaag
aacaacagttttgtgaatgaaatcatttcccgaacgaaagttacatcatga
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