Harpia harpyja (harpy eagle): 128150497
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Entry
128150497 CDS
T10541
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128150497 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhar03400
]
128150497 (MSH6)
DNA repair and recombination proteins [BR:
hhar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128150497 (MSH6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
128150497
NCBI-ProteinID:
XP_052662678
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Position
13:complement(4228935..4244136)
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AA seq
1373 aa
AA seq
DB search
MSRQSTLLRFFPKASPAPPRAAAPAPAPAPVPPQAGAGTRRRVSGEQNGRQAAAAATTSP
TAAASNGAPGRAAARRKEAGEKGGGNGAAAKAPSVSCEYSPGDLVWAKMEGYPWWPCLIY
NHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYLRPYKGSSDGETRKGGMFYSTKPE
IKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEEMEQMSESASGNSDDCNSEED
VKTNKRVMSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEVASSEEGSSGVDENESTDT
ETDTESVAESPIKVPSKRKRREINKPAKRSSLENEHSETPKRAATVSLEAKSKLTSFAAP
ETFESQANTCSGGTSGFAVWEHEKLDWLQEGKKKDAHRRRQSDPGYDPCTLYVPEDYLNK
CTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHSGFPETA
FGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRREICRIITKGTQTYS
VLDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLVA
HYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLLEEGYFKEKQ
NSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQELLSLANFE
EYVPVDIDTAKTTSPSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCCT
PFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDLERLLSKIHS
IGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEEIASDFKSKIL
QQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKALQDIKAV
EEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESVVSRNLPEEYELKSTRKGYKRYW
TKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLDVLMSLANYS
QDGGGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIGSKDEDSSSEA
SCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMAGE
STFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAEKIKCRTLFST
HYHSLVEDHSHNVAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFNAARLAN
IPEEVIQKGHRKAKEFEKMTLSLRVFRYLCLVVDGATSDANAVQKLTAMINHL
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagagcaccctgctccgcttcttccccaaggcttccccggcaccgcctcgg
gcggctgcaccggcaccggcacccgctcccgtccctccgcaggccggcgccggcacccgc
cgccgcgtttcaggggagcagaatggccgccaggccgccgccgccgccaccaccagcccc
accgccgcggcgagcaacggtgcaccgggcagagctgcggcccggcgcaaggaggcgggg
gagaagggcggagggaacggcgcggccgccaaggcccccagtgtctcctgtgagtattca
cctggtgacttggtctgggccaagatggaaggttatccttggtggccatgtctcatatac
aaccatccgactgaaagaacaatagtcagaggaaaagggaaatccactcgtgtccacgta
cagttttttgatgacagccctacaaggggctgggtcagtattaaatatctgaggccatat
aaaggttcatcagatggggagacacggaagggaggtatgttttatagtacaaagcctgaa
attaagagagcaatggtgctagcggacgatgcaatgagtaaagataaaactaagcggctt
gaactggcagtatgcagtgaaccttcagacacagaggaggaggaagaggaagaggaggaa
atggagcagatgagtgaaagtgcatcaggcaacagtgatgactgcaatagtgaggaggat
gtgaagactaataagcgagtaatgagcagggaaagtgccataaaagccaaaagaagaaga
gtgttggattctgacagtgatcatgatggttctgacgtagagttcaagcctgatgtgaaa
gaagtggcaagcagtgaggaaggtagtagtggggtggatgaaaatgaatctactgacaca
gagacagacacagagagtgttgcagaaagccccataaaagtcccttctaaacgaaagaga
agagagataaacaagcctgctaaaaggagtagcttagaaaatgaacattctgaaacgccc
aaaagagcagcaacggtttctttagaagccaagtctaagctgacatcatttgcagcacct
gaaacttttgaatctcaagcaaatacttgcagtggaggcaccagtggcttcgcagtatgg
gaacatgaaaagcttgattggctgcaggaagggaaaaagaaagatgcgcacaggagacgg
cagagtgaccctggttatgacccatgtactctgtatgtacctgaggactatctcaacaag
tgtacgccaggaatgcggaggtggtggcagctgaaaagtcaaaacttcgatgctgtgatt
ttctacaaagttggaaaattctacgagttgtatcatatggatgcagtcactggtgtaaac
gagttgggcctgatctttatgaaaggtacttgggcccattcaggttttccagaaactgca
tttggcagattctctgatgttctagtgcagaaaggctacaaggtagcccgtgttgagcaa
acagaaactcccgaaatgatggaaacgcgctacaagtcaatggcccacccaacaaaattt
gacaaggttgtacgccgagaaatatgcagaatcatcaccaaaggaactcagacttacagt
gttctggactgtgatccctccgagaaccataacaaataccttctgtgcgttaaggaaaaa
gaagactcctctggacaacgtgtttatggggtctgctttgttgacacgtcggtggggaag
ttttatgtaggccagttctcagatgaccggcactgttcgaggtttaggactttagtagcg
cattacactcccgtgcaggtactgtatgagaaggggaacctgtctgtggacacacaaaag
atactgaagggctcacttgtttcttgcattcaggaagggctgatctctggttcccagttc
tggaatgcctctaaaacactaaaagtccttcttgaagaaggatatttcaaggagaaacag
aactctgaaaatggatgttctctgccctctgtaatcaaatctttgacttcagagagcgac
tcgctgggattaactcctggtgaaaacagtgaattagctttgtcagctcttgggggatgt
gtcttctatctcaaaaaatgtttgattgatcaggagctgttatcgctggcaaactttgag
gagtatgtccctgtggatattgatactgcaaaaactacgagtccaagtagtttctttgcc
aaaactgaccagcggatggtgctggatggagtcaccctgatgaacttggaagtcctgcag
aatggaaccaatggaaccacagaaggtactttgttggaaaggattgattcttgttgtacg
ccatttgggaagcgactcctgaaacagtggctctgtgctccgctttgtaatcctaaatcc
atcaatgatcgattagatgctgttgaggaccttctggcagtgccagataaaatgtctgaa
gttagcgagcacctgaagaaacttcctgaccttgaaaggctgctcagcaaaattcacagt
attggatcgccacttaaaagtcagaaccatcctgacagcagggccatcttttatgaagaa
atcaaatacagcaaaaaaaaaattgctgactttttgtctgcactggaggggtttaaagta
atgaatgaaattgttgatgtcatggaagaaattgccagcgacttcaaatctaaaatcctt
cagcagctggtcacccgcaaagccaaaaatccagatggccgcttcccagacttgagtgca
gagcttaaaagatgggatactgcttttgatcataaccaagctcgaaagactggagtgatt
actccaaaggcaggttttgaccccgactacgataaagcactacaggatattaaagctgtt
gaggaagatcttcacaagtacctggataagcaacgcaaactgcttggattcaaatccatg
ctctactggggggcaggcaaaaaccgataccaaatggaaataccggaaagtgtagtatca
cgtaatttgcctgaggaatacgagttgaagtcaaccaggaagggatataaacgttactgg
accaaggagatagagaagatgctggctgccatggttaatgctgaagagcgcagagatgca
gcactaaaagactgtatgaggcgtttgttttacaacttcgataaaaatagcaaagactgg
cagacagctgtggaatgcattgctgtgttagatgtcttgatgtcccttgctaactacagt
caagatggtggtggaccactgtgccgacctgtaattctactgcctgtggatagtgctcct
cccttcctggaacttaaaaattcacgccatccgtgtattacaaaaactttctttggggat
gattttattcctaatgacattgtgataggcagcaaagatgaagatagcagtagtgaagct
tcctgtgtgttagtaactggcccgaatatgggtggcaaatctacgctcatgagacaggct
ggtctcctggttataatggctcaactgggatgctacgtacctgctgaagtctgcaggctt
acaccgatcgacagagtatttacgaggcttggcgcctcagacagaattatggcaggtgaa
agtaccttctttgttgaattgagtgagacttccagcattctccagcatgcaacagagcat
tcccttgtccttgtggatgaactgggcagaggcacagctacttttgacggaacagctata
gcaagtgcagttgtgaaagaacttgcagagaaaatcaagtgtcggaccctgttctccaca
cactaccattcgctggtagaggatcattcacacaacgtggctgtgcggcttggccacatg
gcatgtatggttgaaaatgagagtgaggatccaagccaggaaacaattacgttcctgtat
aagttcatcgaaggagcatgtccaaagagctatggcttcaatgcagcaagacttgctaat
attccagaggaagttattcagaaggggcacagaaaagcgaaagagtttgaaaaaatgacc
ctttcactgagagtatttaggtatctctgcctggtggtggatggcgcaacaagcgatgca
aatgctgttcagaaacttaccgctatgatcaatcatctttaa
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