Harpia harpyja (harpy eagle): 128151782
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Entry
128151782 CDS
T10541
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128151782 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhar03021
]
128151782 (CPSF3)
03019 Messenger RNA biogenesis [BR:
hhar03019
]
128151782 (CPSF3)
Transcription machinery [BR:
hhar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128151782 (CPSF3)
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128151782 (CPSF3)
U7-dependent histone pre-mRNA processing factors
128151782 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
128151782
NCBI-ProteinID:
XP_052665396
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All DBs
Position
15:complement(17292041..17315938)
Genome browser
AA seq
691 aa
AA seq
DB search
MSAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVHKISKKVDMEVYRKRMEIMLQDMFGEDCVSSKDGSVLCITVDGKTANISLDTRTV
DCEPGSEDDESLREMVELAAQRLYDALSPVY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagcggaaagccgaggccctgatcccggcggaggagagcgatcagctgctc
atccggcccctaggtgctggccaagaagtaggaaggtcatgcattattctggagtttaaa
ggaagaaaaataatgcttgattgtggaatccatcctggactagaaggaatggatgctctt
ccttacattgatttaatagatcctgctgagattgatctcctcctaattagtcatttccat
ttagatcactgtggggctttaccatggtttttgcagaaaacaagttttaaaggaaggacg
tttatgactcatgccacaaaagctatttacagatggcttctttcagactatgtcaaagtc
agtaatatatcagcggatgacatgctatatacagaaacagaccttgaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgt
taccacgcaggccatgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
cttttatatacaggtgatttctcaagacaggaagatagacatctgatggcagctgagatt
cccaacattaaacccgatattcttataattgaatccacgtatggtactcatattcatgaa
aaaagggaagaacgagaggcaagattctgtaatactgttcatgacattgtaaatagagga
ggtagaggtcttattcctgtgtttgccctgggacgagctcaagaactacttttaatttta
gatgaatactggcagaatcatcctgaactccatgatatccctatatactatgcctcctct
ttggcaaagaaatgtatggcagtttatcagacgtatgtcaatgccatgaatgacaaaatc
cgcaagcaaattaacatcaacaatccatttgttttcaagcatattagtaatctgaagagt
atggatcattttgatgatattggcccaagtgttgtgatggcttccccaggtatgatgcag
agtggcttatccagagagttgtttgagagctggtgcacagataagagaaacggagtaatt
atagcagggtactgtgttgaaggaacgcttgctaagcacatcatgtctgaacctgaagag
atcacaactatgtcagggcaaaaactcccactgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacaaactagtgaatttatccgggccctgaaacctccacat
gtgattttagttcatggtgagcagaatgaaatggccagattgaaagcagcattgatacgg
gaatatgaggataatgatgaagttcatatagaagttcataatcctaggaatactgaagct
gtgacattaaacttcagaggagaaaaacttgccaaggtgatgggttctttagcagataag
aaaccagagcaaggacagagaatttctggaatcctagttaaaagaaattttaactatcac
atcctttctccgtgtgacctctccaattatacagacttggcgatgagcactgtaacgcag
acacaagccattccatatacaggcccttttaatctgctttattatcagttacaaaaactt
actggtgatgtagaagaaatagagatccaacaaaaaccggccctgaaggttttcaaaaat
attactgtgatccaggaaccaggcatggtagtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacaccgtgacaacagtgatactggaagttcaatcaaatcccaaaata
cagaaagctgcagtacataaaatttccaaaaaagtagatatggaggtgtacaggaagaga
atggagatcatgcttcaggatatgtttggagaagactgtgtgagttcaaaagatggctct
gtcctatgcatcacagttgatggaaagactgcaaacatttcactggacactcggacagtt
gactgtgagccaggaagtgaagatgacgaatcccttcgtgaaatggtggagctggctgcg
cagaggctttatgatgccctcagcccagtatactga
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