Harpia harpyja (harpy eagle): 128151950
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Entry
128151950 CDS
T10541
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar04512
ECM-receptor interaction
hhar04514
Cell adhesion molecule (CAM) interaction
hhar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128151950 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
128151950 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128151950 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhar04131
]
128151950 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hhar04090
]
128151950 (SDC1)
00535 Proteoglycans [BR:
hhar00535
]
128151950 (SDC1)
Membrane trafficking [BR:
hhar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
128151950 (SDC1)
CD molecules [BR:
hhar04090
]
Proteins
128151950 (SDC1)
Proteoglycans [BR:
hhar00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
128151950 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
128151950
NCBI-ProteinID:
XP_052665782
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All DBs
Position
15:10929237..10955595
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AA seq
309 aa
AA seq
DB search
MISVVAVWLVALCFQAAVPQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSHTWRIPG
EPANSSLLATPVDFNEQLFRGTESRTEKEVISPPATSNVVTEEPVVAVKDEVLILGSPDE
KPTNDAVTTTVRSPTTHLPSVAHVTPSEASGTVHELKPKIPSSEMPDTKDVPEPHSTIHP
EGDITATPTTTAPKDVVPTHEEVSEDGSGDPGDFILTKDEDLVPTQNSEVPADSGRNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataagcgtggtggccgtgtggctggtggccctttgcttccaggctgctgtcccgcaa
actacaaatctgaaccttcctcctgaagaccttgattcatctggtgatgatgacgatgca
ttctcaggttcaggtgcaggtcccctgactgaccagtctcacacctggagaatcccagga
gaaccagctaattcctcattactggcaacaccagtggatttcaacgaacagctgtttcgc
gggactgagagccgaactgaaaaggaagtaatatctcctcctgcaaccagtaatgtagtg
acagaggagccagtggtagctgtgaaggacgaagtgctcatcctgggctcacctgatgag
aaaccaacaaacgatgcagttacaacaacagtgagaagccccactactcacttgccttca
gtggctcatgtaactccttcagaagcctccggcacggtccacgagctcaaacctaaaatc
cctagctctgagatgccagacactaaagacgtgcctgagccccactctaccatccatcct
gagggagacatcactgccacccccacgacgacagctcccaaggacgttgttcctacacat
gaggaggtttctgaggatggctccggagacccgggagacttcatcttgactaaagatgag
gatttggtccccacccagaactcagaagtgccagctgactctgggaggaatgccaaagca
gcaggagcctcgggaattatggacagaaaagaagttcttggaggtgttattgctggagga
ctagtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaa
aaagacgaaggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaaa
ccacacaaacaagaagaattctatgcataa
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