KEGG   Harpia harpyja (harpy eagle): 128151950
Entry
128151950         CDS       T10541                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
hhar  Harpia harpyja (harpy eagle)
Pathway
hhar04512  ECM-receptor interaction
hhar04514  Cell adhesion molecule (CAM) interaction
hhar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hhar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128151950 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    128151950 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128151950 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hhar04131]
    128151950 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:hhar04090]
    128151950 (SDC1)
   00535 Proteoglycans [BR:hhar00535]
    128151950 (SDC1)
Membrane trafficking [BR:hhar04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    128151950 (SDC1)
CD molecules [BR:hhar04090]
 Proteins
  128151950 (SDC1)
Proteoglycans [BR:hhar00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   128151950 (SDC1)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 128151950
NCBI-ProteinID: XP_052665782
LinkDB
Position
15:10929237..10955595
AA seq 309 aa
MISVVAVWLVALCFQAAVPQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSHTWRIPG
EPANSSLLATPVDFNEQLFRGTESRTEKEVISPPATSNVVTEEPVVAVKDEVLILGSPDE
KPTNDAVTTTVRSPTTHLPSVAHVTPSEASGTVHELKPKIPSSEMPDTKDVPEPHSTIHP
EGDITATPTTTAPKDVVPTHEEVSEDGSGDPGDFILTKDEDLVPTQNSEVPADSGRNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq 930 nt   +upstreamnt  +downstreamnt
atgataagcgtggtggccgtgtggctggtggccctttgcttccaggctgctgtcccgcaa
actacaaatctgaaccttcctcctgaagaccttgattcatctggtgatgatgacgatgca
ttctcaggttcaggtgcaggtcccctgactgaccagtctcacacctggagaatcccagga
gaaccagctaattcctcattactggcaacaccagtggatttcaacgaacagctgtttcgc
gggactgagagccgaactgaaaaggaagtaatatctcctcctgcaaccagtaatgtagtg
acagaggagccagtggtagctgtgaaggacgaagtgctcatcctgggctcacctgatgag
aaaccaacaaacgatgcagttacaacaacagtgagaagccccactactcacttgccttca
gtggctcatgtaactccttcagaagcctccggcacggtccacgagctcaaacctaaaatc
cctagctctgagatgccagacactaaagacgtgcctgagccccactctaccatccatcct
gagggagacatcactgccacccccacgacgacagctcccaaggacgttgttcctacacat
gaggaggtttctgaggatggctccggagacccgggagacttcatcttgactaaagatgag
gatttggtccccacccagaactcagaagtgccagctgactctgggaggaatgccaaagca
gcaggagcctcgggaattatggacagaaaagaagttcttggaggtgttattgctggagga
ctagtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaa
aaagacgaaggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaaa
ccacacaaacaagaagaattctatgcataa

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