Harpia harpyja (harpy eagle): 128152089
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Entry
128152089 CDS
T10541
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128152089 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhar03021
]
128152089 (SMARCC2)
03036 Chromosome and associated proteins [BR:
hhar03036
]
128152089 (SMARCC2)
Transcription machinery [BR:
hhar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128152089 (SMARCC2)
Chromosome and associated proteins [BR:
hhar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128152089 (SMARCC2)
PBAF complex
128152089 (SMARCC2)
GBAF(ncBAF) complex
128152089 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
128152089
NCBI-ProteinID:
XP_052666081
LinkDB
All DBs
Position
15:complement(31088200..31096883)
Genome browser
AA seq
1204 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTETVKGKPELQTSASQQMLNFPDKSKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTEEARAEAQPTEEKKEAKEPRDGAAEEEAKEKAGEAPKKEEEKGKEAEGEKEPD
KGDGDGAGEPEKEKEAKEGPDEAPKEPPEPEAERKAKVERDIGEGNLSTAAAAALAAAAV
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR
QAFHMEQLKYAEMRARQQHFQHLQQQQQQQPPPLPPGAQPLPATAAGAPLAPAAHPLGAP
PAPAMVAPAEPVGQPLPGAPPPQPPPPPGAPAVPHAPAPFPGQQPPSQSLAGSLGGSGHP
AVPGNAPAALPFGLPPSAIPFSMANPPAEPLGATFPANPPALPLHGALASSMPSGGLPPT
THPPGLALPHLAGGSAAAHSPAIVAAVQGSLLPNPGLLAEQGPPLQTDPIAPSPSTATPV
PPTQ
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctctggctcggcaagaactacaagaagtacatccag
gccgaaccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtcttcggcaagcacgtcagcaacgcgcccctcaccaagctgccgataaaatgc
ttcttggatttcaaggcgggaggagccctgtgccacatcctggcagcggcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggaccgcaac
gtggagatgttcatgaccatcgagaaatccttggtgcagaacaactgcctggcccggccc
aacatcttcctgcaccaggagatcgagcccaagctgctgagcaagctgaaagacatcgtc
aagaggcaccagggcacggtgaccgaggacaagagcaacgcatcccacattgtctgtcct
gtccccgggaacctggaggaagaggagtgggtccggccggtcatgaagcgcgacaagcag
gtcctgctgcactggggctactaccctgacagctatgacacctggatccccgccagcgag
attgaggcctctgtagaggacgccccaacaccggagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaatgaggaggactatgaggtgacg
gacgagaagagccctgttgcccgcaggaagaagatctcagccaagacgctgacagacgag
gtgaacagccctgactcggacaggcgggacaagaagggaggcaactacaagaagcgaaag
cgctcaccctccccctcgcctaccccagaggccaagaagaagaacgcgaagaagggaccc
tccaccccctacaacaaatccaaacgagggcaccgtgaggaggagcaggaggacctgacg
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtcaccctgcccaagaca
gtcaacaccaagaaggactcggagtctgcgcctgtcaaggggggcaccatgacagacctg
gatgaacaggaggacgaaagcatggagacggccggcaaggatgaggaggagaacggaacc
ggcagcaagggggagcaggccaagaaccccgacctgcacgaggacaatgtgacggagcag
acccaccacatcatcatccccagctacgctgcctggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaatggcaagaataaatccaagacccccgaa
atatacttggcataccgcaacttcatgatcgacacgtaccggctcaacccccaggagtac
ctgacctccacggcgtgccgccgcaacctggccggggatgtctgtgccatcatgcgggtc
cacgccttcctggagcagtggggcctcatcaactatcaggtggatgccgagagccggccc
acccccatgggccccccgccgacctcccacttccacgtcctggccgatacgccctcgggg
ctggtgccgctgcagcccaaaacaccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagacggtgaaggggaagccggag
ctgcagacctcggcttcgcagcagatgctgaacttccccgacaagagcaaggagaagcca
gccgacatgcagaacttcggcctccgcaccgacatgtacaccaagaagaacgtcccctcc
aagagcaaagccgccgccagcgccacgcgggagtggacggagcaggagacgctgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cggacgcaggacgaatgcatcctacacttcctgcggctgcccatcgaggacccttacctg
gaggactcggaggcgtccctggggccgctggcctaccagcccatccccttcagccagtct
ggcaaccccgtcatgagcaccgtcgccttcctggcctccgtcgtcgacccccgcgtcgcc
tccgccgccgccaagtcggctctggaggagttctccaagatgaaggaggaggtgcccacg
gccttggtggaggcccatgtccgcaaggtggaggaggcggccaaggtgacgggcaaggcc
gaccccgcgttcgggctggagagcagcggcatcgccggcaccacctccgacgagccggag
cggatagaggagagtggcacggaggaggcgcgggcagaggcgcagccgacagaggagaag
aaggaggccaaggagccccgggatggcgccgcggaggaggaggcgaaggagaaggctggg
gaggcacccaagaaggaggaggagaaggggaaggaggcggagggcgagaaggagcccgac
aagggtgatggcgatggtgcgggggagccagagaaggagaaggaggcgaaggaggggccg
gacgaggcgcccaaggagccaccggagccggaggccgagcgcaaggccaaggtggagcgg
gacatcggcgaggggaacctctccaccgctgccgccgctgccctggccgctgctgccgtg
aaggccaagcacttggcagcagtggaggagcgtaagatcaagtcgctggtggcactgctg
gtggagacgcagatgaagaagctggagatcaagctgcggcacttcgaggagctggagacc
atcatggaccgggagcgcgaggccctggagtaccagcggcagcagctgctggcggaccgt
caggccttccacatggagcagctgaagtacgcggagatgcgcgcccgccagcagcacttc
cagcaccttcagcagcagcagcagcagcagccgcccccgctgccgccgggggcccagccc
ctgcccgccaccgccgccggtgcccccctggcccccgccgcccacccgctgggcgcgccg
cccgcccccgccatggtggcccccgccgagcccgtggggcagccgctgcccggtgccccc
ccgccgcagccgcccccgccgccgggcgccccggccgtcccgcacgccccggcgccgttc
cccgggcagcagccgccgtcccagagcctggctgggagcctcggtggcagcggccacccc
gccgtgcccggtaatgcgcccgcggccctgcccttcggattgcctccatccgccatccca
tttagcatggctaacccccccgccgagcccctcggcgccactttccccgctaacccgccc
gccctcccgctgcatggggccctcgccagcagcatgccgtccggggggctgccccccacc
acccacccacccggcctggccctgccgcacctcgcggggggctcggccgccgcgcacagc
cccgccatcgtggccgccgtgcagggaagcctccttcccaaccccggcctcctcgcagag
caaggcccccccctgcagacggaccccatcgcgcccagccccagcacggccacccccgtc
ccccccacgcagtga
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