Harpia harpyja (harpy eagle): 128152797
Help
Entry
128152797 CDS
T10541
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03015
mRNA surveillance pathway
hhar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128152797 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
128152797 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhar03019
]
128152797 (PABPC4)
03041 Spliceosome [BR:
hhar03041
]
128152797 (PABPC4)
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128152797 (PABPC4)
mRNA cycle factors
Stress granule specific factors
128152797 (PABPC4)
Spliceosome [BR:
hhar03041
]
Complex C
Other components
Complex C specific factors
128152797 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
128152797
NCBI-ProteinID:
XP_052667390
LinkDB
All DBs
Position
16:complement(3385412..3400151)
Genome browser
AA seq
630 aa
AA seq
DB search
MNTAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
AYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAA
AQRVGVGTAAQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggctgccagcagttacccgatggcatcgctgtacgtgggtgacctgcacccc
gatgtcaccgaggccatgctctacgagaagttcagccccgctgggcctgttctctccatt
cgggtctgcagggatatgatcacccgtcggtccctcgggtatgcctatgtcaacttccag
cagccagcagatgctgagcgtgctctagataccatgaattttgatgtgatcaaaggaaaa
cccattcgcatcatgtggtctcagagggacccctccttgaggaagtcaggggttgggaat
gtcttcattaagaacctggacaaatccattgataacaaggcactttatgacacattctca
gcgtttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatgaacggc
atgctgctaaacgaccgcaaagtatttgttgggagattcaagtctcgtaaagagcgggag
gctgagttgggagccaaggcaaaggaattcaccaatgtttatattaaaaactttggggat
gacatggatgatgaaagactaaaggagctcttcagcaaatatggtaaaactctgagtgtt
aaagtgatgacagaccccaccggaaaatccaaaggctttggctttgtaagctttgaaaag
catgaagatgctaacaaggcagtagaagaaatgaatggaaaggatatcaatgggaaaatg
gtatttgtaggccgagcacagaagaaggtcgagcgccaggcagagctgaaacggaagttt
gaacagctaaaacaggagagactcagccggtaccagggtgttaacctatacattaaaaac
ctagatgacactatagatgatgaaaaactgaggaaggagttctcaccttttgggtcgata
acaagtgccaaggtgatgctggaagatggacggagcaaagggtttggctttgtctgcttt
tcctctccagaggaagctacgaaagctgtgacagagatgaatgggcgaattgtgggctca
aagccgttgtatgttgcacttgcacaaaggaaagaggagcgaaaggcccatctaactaat
cagtatatgcagcgcattgctgggatgagagccttgcctgccaacacaatcattaatcag
ttccagcctgctgctgggggatatttcatgcctgctgtgccccaggctcagagcagaccc
gcttactatgcacccaatcagatgacacagatgagacccaacccacgctggcagcaaggg
ggaagacctcaaggcttccagggaatgccaaatgccatgcgccagtctggaccacggcca
gcactgcgccatctggcccctgccggcaatgctccggcctctcgtggcctccctgccgct
gcccagcgagttggcgttggcactgcagcgcagaatttagctcctcgtccgcctgtagct
gcccctgctcccagagcggttcctccttataaatatgcctcaagtgtccgcagcccacac
ccagctgtacagcctttgcaggcacctcagcctgcagtacatgtgcagggacaggaacca
ctaacggcctccatgctggctgctgcccctccccaggagcagaaacagatgctgggggaa
cgtttgttccctctgattcaagctatgcaccccagccttgcaggcaagatcacaggaatg
ctgctagagattgacaactcagagctgctgcacatgctcgagtctcccgagtccctccgg
tcaaaggtggaggaggccgttgcggtgttgcaggctcaccaagccaagaaagaagctgcc
cagaaggtgggcgtggttgctgctacctcttaa
DBGET
integrated database retrieval system
