KEGG   Harpia harpyja (harpy eagle): 128153652
Entry
128153652         CDS       T10541                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
hhar  Harpia harpyja (harpy eagle)
Pathway
hhar03013  Nucleocytoplasmic transport
hhar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hhar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128153652 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    128153652 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhar03019]
    128153652 (THOC2)
   03041 Spliceosome [BR:hhar03041]
    128153652 (THOC2)
Messenger RNA biogenesis [BR:hhar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     128153652 (THOC2)
Spliceosome [BR:hhar03041]
 Complex C
  Other components
   EJC/TREX
    128153652 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128153652 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 128153652
NCBI-ProteinID: XP_052669112
LinkDB
Position
18:6803194..6859952
AA seq 1651 aa
MAGRAPSPRVRRVRVPSFLAGRCVPSDPGSLLHHPGSRRHTGKMAALLPAEWIKNWEKGG
KNEFVQLCRTLSENKSHDNMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDM
PSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQ
SQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLI
GCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSG
ETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSS
EKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKSIA
IALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGP
HLSHDPILFAKVVRLGKAFMKEVGTMKKFVSDRVVKFQSDGSKQEDKEKMEILFSCLLSI
TDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTI
DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTS
LNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVAN
QLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKV
HKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKL
KVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLA
KSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIY
TVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKAD
QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALER
RVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPG
GAGMPTSLTINTVRLEEGTTEETDKLKEKSQGVVKVINKAVNATPKVTTSNGNSASNSKI
TKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDDKAREIKEKTPK
SDKEKEKVKKEEKASKEEKSKTVVTIIESKSAAEKEREKEPSRERDVAKEMKSKENAKGG
EKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKESSAKHYINH
TTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKE
ENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESR
HDKEKPEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq 4956 nt   +upstreamnt  +downstreamnt
atggcagggcgcgcgccgtctcccagggtacggcgcgtccgcgtcccgtcgttcctcgcg
ggccgttgcgtcccctctgacccgggctcgttgctccaccatccgggctctcggcgccac
acggggaagatggcggcgctgctccctgccgagtggataaagaactgggagaaagggggc
aagaacgagtttgtgcaactatgtcgcactctcagtgaaaacaaaagccatgataatatg
ggtttcagagacatccaacaggctttgtatgaactcgcataccatgttgtcaggggaaac
ttaaagcatgatcaagcttctaatgttcttggtgatgtcatagaatttcgggaagacatg
ccttctatcctagctgatgtattctgcatattagatattgaaacaagttgtttagaagaa
aaaagtaagagggatcattttacccaactggtattagcctgtttgtatcttgtatctgac
actgtcctaaaggagcgcttagatccagagacactggagtcattaggacttataaagcag
tctcaacagttcaatcagaaatctgttaaaataaagacaaaactgttttataagcaacag
aagtttaatttgttaagagaggagaatgaaggttatgcaaagctcattgcagaactgggg
caagacttatctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaata
ggatgttttaaccttgatcctaacagagttttggatattatcctagaagtctatgagtgc
aggcctgagtatgatgacttctttgtaccactgatagagtcttacatgtacatgtgtgaa
cctcaaactctgtgccatatccttgggttcaaattcaaattttatcaggatccaagtggt
gagacaccttcctccttatacagagttgctgctgtccttttgcaacataatctcatagat
ttggaagatctttatgttcatcttcttccgggggataatgccatcattgaggaacacaag
cgagagatagtggaagctaagcaaattgtcagaaaacttacgatggttgtcttatcctct
gaaaagaccgaggaaaaggagaaggaaaaagaaaaagaggaggagaaaaccgaaaagcct
cctgataatcagaagcttggtttattggaagctttattaaaaattggcgattggcagcat
gcacaaagtattatggatcagatgcctccgttttatgctacttcacacaagtctattgcc
attgccctttgccagcttgtacatgtgacaattgaacctctgtaccgcagagttggtgta
cctaaaggagctaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaa
gcagacagcttcgaggacttgagaaaggaagtgttcaacatgctttgttaccttggtccg
catctctcccatgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatg
aaagaggttggaactatgaagaaattcgtcagtgacagagtggttaagtttcagtctgat
ggaagcaaacaagaagataaagagaaaatggagatactgtttagctgtttgttgagtatt
accgatcaagtcttactgccatctctttctctgatggactgcaatgcatgcatgtctgaa
gaattatggggaatgttcaagacttttccataccagtaccggtaccgtctttatgggcag
tggaagaatgaaacatacaatagtcacccacttctagtgaaagttaaagctcaaaccata
gaccgagccaaatatatcatgaagcgtttaactaaggaaaatgtgaaaccctctggaagg
caaattgggaagctcagccacagcaatcctacaattttatttgattatattttatcacaa
atacaaaaatacgataacttaataactccagttgttgattcactgaaatacctcacttca
ctgaactacgatgttttggcatactgtatcattgaagctctggcaaaccctgaaaaggag
agaatgaagcatgatgacactacgatctcgagctggctgcagagtctggctagcttttgt
ggtgcagttttccgaaaatacccaattgaacttgctggtctacttcaatatgtagccaac
caactgaaagccgggaaaagctttgatttgcttattttaaaagaggtagtacagaaaatg
gcagggatagaaattacagaggaaatgacaatggaacaattggaagccatgactggtgga
gaacaactaaaagctgagggtggatactttggacaaatcaggaatacaaaaaaatcttct
cagagattgaaagatgcattattggaccatgatcttgcccttccactgtgcttgcttatg
gctcaacagagaaatggtgtgatctttcaagagggaggggaaaaacatctgaagctggtg
ggaaaactgtatgatcagtgccatgacaccctggtacaatttggtgggtttttagcatcc
aatctaagcacagaggattacattaagcgagtgccttctattgacgttctctgtaatgag
tttcacacacctcatgatgctgcgtttttcctctcaagacccatgtatgcacaccatatt
tcttctaagtatgatgaactaaaaaaagctgagaagggaaataaacagcagcacaaagtt
cacaaatacattacatcgtgtgagctggtgatggctcctgttcatgatgctgtaatttct
ctgcaccttcccaaggtctgggacgacatcagccctcagttttatgctacattctggtct
ttgacaatgtatgaccttgccgtcccacatagtagctatgacagagaagtcaataaactt
aaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaa
gaaaaagaacgttgcacagctcttcaggacaagctccttgaagaagagaagaagcagctg
gagcatgtgcagagggttctacagaggctgaaactagagaaggataactggcttctggca
aagtctaccaaaaatgagactatcacaaaatttttgcagttatgtatatttcctcgatgc
attttttcggcaatcgatgcagtgtattgtgctcactttgtagaacttgtgcatcagcag
aaaacacccaacttctccacacttctctgctatgacagagttttctctgatattatatat
acagttgcaagttgcactgaaaatgaagctagtagatatggcaggtttttatgctgtatg
ctggagactgtgactagatggcatagtgacagagtcatatatgaaaaggagtgtggcaac
tatccaggcttcctaactatattacgggcaactggatttgatggtggaaataaagctgat
caattggattatgagaattttagacatgtggtacacaaatggcactataaattaactaag
gcttctgtgcactgccttgaaacaggtgaatatacacatatcagaaatatcctgattgtg
ctgaccaaaatccttccatggtatccaaaagtgctgaacctgggccaagccttggaaaga
agagtacataagatatgtcaggaagagaaagagaagagacctgatctatatgcattggct
atgggctattctgggcagttgaaaagtaggaagcctttcatgataccagaaaatgaattc
caccacaaagacccacctgccaggaatgctgtagctgcaacagtgcaaaatgggccaggt
ggtgctgggatgcctacatctctcacaataaatacagttagactggaagaaggcactacc
gaggagactgataaattaaaggagaagtctcagggtgtggtgaaagttattaataaagct
gtcaacgctacaccgaaggtgacaacaagcaatggaaacagtgcttctaatagcaaaatt
actaaagagaaagatgataaagaaaaaagcgggaaggaaaaagataaagaaaaaaaagac
aagactccagctgccactccagagatgaaggcacttgggaaagatgggaaagataaacca
aaggaagaacgggcaaacaaagatgataaagcaagagagatcaaggagaaaacgccaaaa
tctgacaaagagaaggaaaaagtgaagaaagaagaaaaagcttcaaaagaagaaaaatcc
aagacagttgttaccatcattgagtcaaagtcagctgcagaaaaggagagagagaaggag
ccgtccagagaaagagatgtagcgaaggaaatgaaatccaaggaaaatgctaaaggagga
gaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagaa
tctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccatcacattcctca
acagtaaaggacaacctcaacgaactcaaggaatcttcagcaaagcactacattaaccac
actactccaacactgtccaagagtaaggagagagaagtggacaagaaagatttggacaag
tcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaa
agggatcattcaaacagtgaccgagaggtaccacaggattcaactaaacggcgcaaagag
gaaaatgggacaactggttcttcaaaacatagtaaaagtgaaagtccttctgattcccct
cgcttaaatgaaaaggagaaggagaagaacaaatcaaaatcttcaggaaaagagaaaggt
gattcaattaaagcagaaaagatggagaagagctcttctggcagcaaaaaggaatcaaga
catgataaagaaaaaccagaaaagaaagaaaaacgagacagtactggagggaaagaagaa
aagaaacatcataaatcttcagacaagcacagataa

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