Harpia harpyja (harpy eagle): 128154004
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Entry
128154004 CDS
T10541
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128154004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhar03019
]
128154004
Messenger RNA biogenesis [BR:
hhar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128154004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
128154004
NCBI-ProteinID:
XP_052669977
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All DBs
Position
18:2612323..2641244
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AA seq
716 aa
AA seq
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MRLGAAHAFPAAPSAAAAGLSGPGSFCNGGAGGAKARRRPPLPRRGVSPSSAPPSPPPTP
TRPPPRPREPKKEQWRRVSEASSARPGGCGPSPPSADRGGCAPRLRPRREPSGAPAAASA
SPPPPPPPPAAAAAAGEGGQLGAPRSPQPRGAAAMATELEPPAAGAVPGAAPLEAEEDEE
HWLYGDDTTGKQEDGPISGHAESSHPLQDAPQENRPVSNEDREMSQHALPSGEDDEDDSD
SDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAGNING
LPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPISTEN
KITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGT
IRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFAPPAGPPPPP
LAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPASY
NNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSSSHWEYSGSRRERERERE
RERERERDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRSRDRSREREDRHRERRHR
DKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGAQEGEEQDAKE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcggcgccgcgcatgcgttccccgccgctccctccgccgccgcggcgggtctc
tcagggcccggctccttttgtaacggcggagcgggcggcgctaaggcccggcggcggcct
ccgctcccacgccggggggtctcgccctcctccgcgcctccctcccccccccccacgccc
acccgcccacctccccgcccgcgggagccaaagaaagagcaatggcggcgcgttagcgag
gcgtcctcggcgcggcccggcggctgcggaccttccccgcccagtgccgaccgcggcgga
tgcgcgcctcgcctcaggccccggcgggagcctagcggggctccggcggccgcctccgct
tctcctcctcctcctcctcctcctcctgctgctgctgcggccgcgggggagggcgggcag
ctcggggcgccccgctcccctcagccccgcggcgcggcggccatggccaccgagctggag
ccgccggcggctggcgccgtgccgggcgcggctccgctggaggcggaggaggacgaggag
cactggctctacggggatgacaccactggtaagcaagaagatggaccaatttctggacac
gcagaatcttctcatcctttgcaagatgctcctcaggagaaccggcctgtcagcaatgaa
gaccgagagatgtcgcaacatgcccttccaagtggtgaagatgatgaagatgacagcgat
agcgacagtgatgatgatgacgtgaaagttactattggcaacattaaaacgggagcacca
tcgtacatgggaactcctatgaatctaaacttaaaaacgggtagaggctatggagcatct
gcttcagccaagttgcagcccaaaggtattgacttggatgccgcagggaatataaatgga
ttgcctgttatagaagtggatttagattcatttgaagacaaaccgtggaggaaaccaggt
gctgatctttctgattactttaattacggattcaatgaagaaacatggaaagcttattgt
gaaaagcagcgacggcttcagcttggactggatcctgctcctcccatcagcactgaaaat
aagatcacagttcagcaaggaagaacaggaaatgctgaaaaagaagtggaaaacaacatc
atcaaaacagaattcaaaacagacttcttggctctggtgggagggcgcatgaaggctggg
cctcctcctaataggaagctgggtggaacaattgatgtgatcggtggccaggcaggcaca
attaggagagtagaaggaagacgtcgtgataagcatgcctctgaggaaaacccaattcag
gtccttggagaccacggaagtaagccacaacccccacagcagccccagcagccatcacag
ccccaacagccacctcagcaacagccgtttgcaccaccagcaggcccaccgcctcccccg
ctcgctgggccacctccaccacacttcctccaccctcctccaccagttacttctgttcca
cctcccctgcatcctccaggtctgccaccacccggtcctattccagggttgttcccgcct
cctctggcaccaccaccagctctcctcattccaaccttggatggccagccagccagctac
aataacaggcagcctcctccatttggctacaactctgcagattcaggtttcatcagctac
ccacccatctccacgtcccacacgccctgggtgacgacggtggacaaaggcacaagcagt
tccagcagcagccattgggagtactcaggctcgaggcgtgagagggagcgggaacgtgag
cgggaaagggaaagggagagagacagagaccgcactccgaccactagtgaatacaacaat
gatgatgaacgataccgctactacagccgagagcgcagctacgactttgaacgtgactac
cgccggagtcgagatcgcagcagggagcgagaggatcgacaccgagagcgcaggcacaga
gacaaagaggagagcagcaagcataagtcttcaagacgcaagcagcatgagagcgaggag
ggggagagtcatcggcgtcacaagcacaaaaagaacaagcgtagcaaagaggagaaggag
gccagtgaagatggtgcccaggagggagaggagcaggatgccaaggagtaa
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