Harpia harpyja (harpy eagle): 128154309
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Entry
128154309 CDS
T10541
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03320
PPAR signaling pathway
hhar04148
Efferocytosis
hhar04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128154309 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128154309 (RXRA)
03320 PPAR signaling pathway
128154309 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhar03000
]
128154309 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hhar03310
]
128154309 (RXRA)
Transcription factors [BR:
hhar03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128154309 (RXRA)
Nuclear receptors [BR:
hhar03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128154309 (RXRA)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
128154309
NCBI-ProteinID:
XP_052670657
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Position
19:complement(4333166..4450723)
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AA seq
459 aa
AA seq
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MDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLSSPINGMGP
PFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHP
SGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQ
RNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVE
PKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRA
GWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMD
KTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLP
ALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccaaccaagtcaattccacgtccctgaactctcccacgagccgggggccc
atggccaccccatccctccacccgtccatcgggccgggcatcggctcctcgctgggctcc
ccgggccagctccactcgcccatcagcaccctgagctcacccatcaatggcatgggacct
ccgttctccgtcatcagctcgcccatgggcccgcactcaatgtccgtcccctccaccccc
agcctgggattcggcaccagcagcccacagctcaactcacccatgaaccccgtcagcagc
tcagaagacattaagccacccctggggctcaatggagtcctcaaagtgccagcacatccc
tcaggaacgatggcctccttcaccaagcacatatgtgccatctgcggggacagatcttca
ggtaaacattatggggtttacagctgcgagggctgcaaaggcttcttcaagcgcacggtg
cggaaagacctcacctacacttgccgcgacaacaaggactgcttgatcgacaagcgccag
cgcaaccgctgccagtactgccgctatcagaagtgtcttgcgatggggatgaagcgagaa
gccgtccaggaggagaggcagcggggaaaggaccgcaacgagaacgaggtggagtcgaca
agtagcgctaacgaggacatgcccgtggaaaagatcttggaagctgaactcgcagtggag
ccaaagacagagacgtacattgaagcaaatatgggcttgacgccgagctcgcccaatgac
ccagtgacgaacatatgccaggcagcagacaaacagctcttcaccctggtggagtgggcc
aagaggatcccccacttctccgagctgcccctggacgaccaggtcatcttgctcagagca
gggtggaacgagctcctaatcgcctccttctcccaccggtccatagccgtgaaagacggg
atcctcctagccaccgggctccacgtgcaccggaacagcgcgcacagtgccggtgtcggg
gccatcttcgacagagtactgacagaactcgtgtcaaaaatgcgagacatgcagatggac
aagacagagctaggctgcctgcgagccattgtcctcttcaaccccgactcgaaaggtctc
tccaacccggctgaagtggaggcgttacgggagaaggtgtacgcatcgctagaggcatat
tgcaaacacaaataccccgaccagcccgggaggttcgcaaagctcttgctccgtctccca
gctctccggtccattggcctgaaatgcctggagcacctcttcttcttcaagctaataggc
gacacaccaatcgacaccttcttgatggaaatgctggaagcgccccatcaaatgacttag
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