Harpia harpyja (harpy eagle): 128154624
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Entry
128154624 CDS
T10541
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
hhar Harpia harpyja (harpy eagle)
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhar03021
]
128154624 (SETX)
Enzymes [BR:
hhar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128154624 (SETX)
5.6.2.5 RNA 5'-3' helicase
128154624 (SETX)
Transcription machinery [BR:
hhar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128154624 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
DUF8602
nSTAND3
RNF216P1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
128154624
NCBI-ProteinID:
XP_052671463
LinkDB
All DBs
Position
19:5455260..5493711
Genome browser
AA seq
2817 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKRLSPEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE
VLWELETSRLVAHIKKSMREEAGEDDELFIVDENGDTQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVSELCVEVLCRMEQGHSSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYSFSMIEKGKLILLPSHLYDTANYKNYWL
GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKETADDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYNDDMVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHDSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKHILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPAIAFTRCTEKASGHYARGSSAVSLQASNSVQHACVQLIRSLL
REGYQIGQHALCKQYLDKLNLLLRGTLSLGWQLNIQETQELQMCLKQVIRSIKDRALNTS
APVGNNANSTTLPAISIKQEKSARGGDDLCSPFAVVLKEGEDCQENLLPRRKSAWEEECR
DASKSSRSWTSTEGLLVNIKKELNDLTTQEYVCPQNPLAAKVSGKVQGNRNNDLVAGKCD
MDNQCFNPDAQYSDFRRGRELENKCEAGPGTLMHLAAQTCIGSPEHVYSSDVKESCMSPS
SSSKFKVDVNRLMNLKNMVQKTEWPSKVSQLVKTHDLKKCSLAASASKAEVERPKFCTGY
LCTSKDCHKHWGVNTVCENEISVGTPSSRSCESAQEKSVNSAFQSRLVPTKQVSKETPLD
CSSSSKNECGMQENEDDSVLLSGIRDTLLQKVSTEEKSGSLLKSVFKKDTDMQTSDQEQP
HLNNLVKHDSKGQISKTYCMDKASANGCVPSSSENKRDISNPASQIRPLSVKCESSDRLF
EFSEYFKRENNSMGKKEEDFAKMVSEDNTVTDSQVDRELGKLSLAAYAKSVNFPFDSSQG
SSVHHNACDIKRKVKGAVRSSNDGQSTKSPCDADCLDNEVIIISDSSDEEKGVADKEETK
KTNENVCPEKQPSTSSCISDSDSKTESKTPSCHLSLEDCESQYFEFETEFDVFSVWQDTQ
AYSTEATQEYKQDHVSASVDSSNSDGLLNDHTNEWGYDLDYISDDAMEEEANLIEKQVEN
ISHEKEADNTKEVTNSTLQESISKGDAKDQLENFADKGAVAKDFTLDSKLTEPRPSTSNI
SLASKLALKKNSASPQKNIAKSKVARTIQRSPKKPPVLKTAQNKKLLQNTSKNSQPGRSM
PAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLESITQLRSYGKAAGRVGVVQK
QKIKLIAPQSLSVKHNKKLLACQDLQFFRQTRPKKSVRVKNPAGSSESRNKKVSKVDARS
MKQKPKSFELASVERLVENQRGEKREETLCPSPSEIKFESLSVEEATCVSKMPGSSDSNR
KSEDNSMMVPPVPMDSSLSSAALVGDDKDEPSGRGCIVQPECEKTTSRENGCKRNENSED
DDGLFLTQLDPVDMELCSEEESVQDTARGSEKTEEMDTAENLQENESSTVVKCKYKDCME
KVEKPAEYCSKHSATSSEADHLFAKPSLPPPSKTRRPSTTKTFSSASSSRNAAFSKDLED
VKLPPPSKSKVNTAKPVVRPPNAKAIPIGNQTRKSPSFSNVPQPRVSNNVLQSQNRQNDN
ASNISRRPAREAYYSSFLGAQQRDHRIFVNEVLQWTYEMFSNSSQFGPPSDLLQSVAGSV
PVQFQGYNDYFSTFFPLMMLNAFETLAQEWIENQRVREKSYYFYLQNFCADLNTADFTAH
FQESDLARQLHPKEDDLIFLVVQKKKDTFREESETEDHIVNHVGLVTRFSRASGCLTRQK
EQHTVCHLSVKTRGNLSFFINKQVKCVVVGSLVTTDRTFKGLLLLSRSPLAKPIINPSYD
DFCPRDLPITSESAASDVNEYNEDQKRAIETAYAMVKQHPGLPKICLIHGPPGTGKSKTI
VGLLSRVLRENIRKEKTTQKTNSKIKPNRFLVCAPSNAAVDELMKKIIVAFKEKCQNRQE
PLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDIQKKKTALDQKLDM
LSRQRAMYRCEKREVSQMLDDEIGRLSKERQQLASQLKEVRRHSQKVQADIILESDIICC
TLSTSGGSLLESAFLRQGLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPP
TVKSVKAQEYGYDQSLMARLHRHLEEQVRKNVLRSLPVVQLTVQYRMHPDICLFPSNYVY
GRTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERENDSFSNPQEVKLVVELIRTIKEK
RKDLGLRRIGIITPYSAQKKKIQEQLDRVFRNNSPGEVDTVDAFQGREKDCIIVTCVRAN
STKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQKRGAIIKTSEK
SYRKDAVKILKLKATVQPSTKAGTKKSPLLQACPSSSKRGELANPREAHSSRELAAGAGH
AVPQGSRGPQQPQRAQAADSRRGSASAPVEAAALPADQEKPRDPRLASMASRTETKGKEQ
ASKDRSRSAQSNPGSTSQQGLDVSSAARGQISRTETPKKPQQTMAQCDMPSTSPYAARHE
GDRRVPVSKSSSKAHSEGGQNNSSKWNKDYQVLARRTSEESPENTESNSAKRRKTSH
NT seq
8454 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacacctagtggttctgacaccactgaattcctgaagagc
tatgcttctaaacggttgtccccggaagatcttgaaggatccaatgatgatctctgctac
tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcatgag
gtcttgtgggagttggaaacctcccgtcttgttgcccacatcaagaaatccatgagggaa
gaagctggagaagatgatgagttgtttatagtggatgagaacggagatacacagctgtct
ggttatgtgggcccagattttgagaataacctgcgagtgccccttctagaaatactgaaa
tatccatacctgctgctgcatgagaaagtcagtgagctgtgtgtagaagtgctctgtaga
atggaacaaggtcacagctcctttcaggtctttgagaaatatccaggaatttatctcttt
ttggtacacccgaatgaagtgattcgtcgatgggctatcctaacagcaaggaatttaggg
aaggttgacagggatgattactatgacttacaggaagtgctgacttgcttgttcaaagtt
attgagttgggtctttttgagagtccagatatttacagcttttcaatgatcgaaaagggt
aaactcatccttctgccatctcatttatatgatactgccaactacaagaactattggcta
gggatttgtatgttgctaacagtgttggaagaacaagctatggactccttgttactgggc
ccagacaaacaaaatgatttcatgcagtccatacttcacaccatggagaaagaaacagct
gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgaaccggagtcagactacaatgatgacatggttacttgcagtcagattgtgtataat
tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac
tgccccaacatgtatgaagatatgcaaacactggctaatgtgcttcagtctgatattggc
agagatatgcgtgtccatgacagcacgtttctgtggttcatcccttttgttcagtcgctt
atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctcg
gaaatcaaacatattctcaatgaaagaatccagcagtgtgacaaaatctctgaatttttt
ctcctgatcttggtgtcgattattgaactacacagaaataaaaagtgcctgcatttgctg
tggattagctcccaagaatgggtagaagcagtggtgagatgtgctaagcttccagctata
gcatttacacggtgcactgaaaaagcatctggacactatgcgagaggttcatcagcagta
tctttacaagcttctaactcggtgcagcatgcctgtgtgcagttgatacgcagccttctt
agagaaggctatcaaattgggcagcatgctctttgcaagcaatacctagacaaactcaat
cttcttctgcgaggaactctatctttaggttggcagctgaacatccaggaaacccaggaa
ttacaaatgtgtttaaagcaagttataagaagtataaaggacagagcattgaatacctct
gcgcctgtaggaaacaatgcaaactccacaactttgcctgccatttctataaagcaagag
aagagcgcacgtggcggagatgacctttgttcaccatttgctgtcgtattgaaggaaggt
gaagattgtcaagagaaccttctccctagaagaaagagtgcctgggaagaggaatgtaga
gatgcatctaaaagttcaagatcttggacatccacagaaggcctcttggtgaatattaaa
aaggaacttaatgacttgacaactcaggaatatgtttgcccacagaaccctttggcagca
aaagtatctgggaaagttcagggaaataggaacaatgatctcgtggcagggaaatgtgat
atggataatcagtgctttaatccagatgcccagtattcagatttcagaagaggcagagag
ttggaaaacaaatgtgaagcaggaccaggaacactaatgcatctggctgctcaaacttgt
attggttctccagaacatgtttacagctcagatgtaaaggaaagctgtatgtctcccagt
tcctcttcaaagtttaaagtagatgtgaatagactcatgaatttgaaaaacatggtacag
aaaactgaatggccctcaaaagtatcacagctagtgaagacacatgacttgaaaaaatgc
agtttagcagcaagtgcttcgaaagcagaggtagagcgaccgaagttttgcactggctat
ctgtgtacaagcaaagattgtcataaacattggggagtgaatactgtatgtgaaaatgaa
atctctgttggtactccatcttcaaggagttgtgaaagtgcacaggaaaaaagtgtcaac
agtgcttttcaatccagactggttccaactaagcaggtatcaaaagaaacaccactagat
tgctctagctcctctaaaaatgaatgtggtatgcaggaaaatgaagatgacagtgttttg
ctttcagggattagagacaccttgctgcaaaaagtatccactgaagaaaaatcaggttca
ttgttgaaatctgtgttcaagaaagacactgacatgcaaacttcagaccaggaacagcct
catttaaataacttggttaaacatgactctaaaggtcaaatttcaaagacatattgtatg
gataaagcttcagcaaatggttgtgttccatctagctctgaaaacaagagggatatatcc
aaccctgcttctcagatcaggccgctgtcagtgaagtgtgaatcaagtgacaggttgttt
gaattttcagagtatttcaagagagaaaacaattcaatggggaagaaggaggaggatttt
gcaaagatggtttctgaagataatactgttacagactcccaggttgatagagaactcggt
aaattatctttagctgcgtatgccaaaagtgtcaattttccctttgattcaagccaagga
agctccgtacatcataatgcatgtgatattaaaaggaaagtgaaaggtgctgtaagatct
tccaatgatggccaaagtaccaagtctccctgtgatgcagattgccttgacaatgaagtc
attataatttcagactcttctgatgaagaaaaaggtgtggctgacaaggaggaaacaaaa
aaaacgaatgaaaacgtgtgtcctgaaaagcagccttcaacttccagctgcatttctgat
agcgatagcaaaacagaatcaaagactccaagctgtcacttgtcactggaagactgtgag
tctcagtactttgaatttgaaacagaatttgatgtcttttcggtttggcaagatactcaa
gcatatagtacggaagcaactcaggagtataaacaagatcatgtttcagcatcggttgat
agtagtaattcagatggcttactgaacgatcacacaaatgaatggggttacgatctggat
tatataagcgatgatgccatggaagaagaagcaaatttgatagaaaaacaggtagaaaat
atctctcatgagaaagaagctgataatacaaaagaagtgactaattcaacattgcaagaa
tctattagtaagggagatgcaaaagatcaactggagaattttgcggacaaaggtgctgtt
gctaaagacttcaccctggactcaaaattgactgaacccagaccatctacatctaacatc
tcattagcttcaaagttggcccttaagaaaaatagcgcaagcccacagaagaacatagca
aaatctaaggtagcaagaactattcaaagaagtcctaaaaaacctcctgttcttaaaaca
gcacaaaataaaaaactacttcaaaatacatcaaaaaattctcaacctggcaggtcaatg
cctgctgtggttcctccaaggaaagttcgacagtgtcctgcaccagcatcaactgtagaa
aaacttggtctgaagaaggcaccccgcaaagcgtttgaattatcccagcgctctttagag
agcataactcaattgcgcagctatggtaaagctgcagggagagttggagttgtacagaaa
cagaagattaaactaattgctcctcagagtttgtctgtaaagcataataaaaaattgcta
gcctgccaagaccttcagttttttaggcagacaaggcccaaaaaaagtgtcagagtgaaa
aatcctgcaggaagttctgagagcagaaacaaaaaagttagcaaagtggatgcaagatct
atgaaacaaaagcctaaaagttttgaactggcatctgttgaaagattggttgaaaaccaa
agaggggaaaaaagggaggagactctttgtccctctcccagtgagataaaatttgaaagc
ctctctgtggaggaggccacctgtgtctctaaaatgcctggttcttcagactcaaacaga
aaatcagaggataacagtatgatggttcctcctgtacctatggattcaagtctctcttcc
gctgcacttgttggagatgataaagatgaaccttcaggaagaggttgtattgtccagcct
gagtgtgagaagacaacttcaagagaaaatgggtgtaaacgaaatgaaaacagtgaagat
gatgatggtttatttttaactcagttagatcctgtggatatggaattatgttctgaggag
gaaagtgttcaagatactgctagaggtagtgaaaaaacagaggaaatggacactgctgaa
aaccttcaggagaatgaatcctcgactgttgtgaaatgtaaatacaaagactgtatggaa
aaagtggaaaaaccggcagagtactgtagtaagcattcagccaccagctcagaagcagat
cacttgtttgctaaaccttctctcccaccgccttctaaaacaagaaggccttccactacc
aaaactttcagctcagcaagttcttcacggaatgcagccttcagcaaggatctagaagat
gttaagctaccgccaccttcaaaaagcaaagtgaatacagcgaaaccggtggtcaggcca
ccaaatgcaaaggctataccaataggaaatcaaacacgcaagtctccaagtttcagtaat
gtacctcaaccccgtgtttctaataacgttctccagtcacaaaatagacagaatgataat
gcttcaaatatttccagaaggcctgcccgagaagcatattactcttcctttcttggcgct
cagcagcgtgatcatagaatttttgttaatgaagtcctacagtggacttacgaaatgttt
tcaaactccagccagttcggacctccaagtgatctcctgcagtctgtagcaggctctgtt
cctgtccaatttcagggatacaatgactattttagtacatttttccccttgatgatgcta
aatgcctttgaaacactggcacaagagtggatagaaaaccagagagtgagagagaagagt
tactacttctacttacagaacttctgtgctgacttgaatacagcagattttacagctcat
tttcaagaaagtgatttggcaaggcagcttcatccaaaggaggatgacttaatctttttg
gtggtccaaaagaaaaaagacacctttagggaagaaagtgagacggaggaccatatagtg
aatcacgttggtcttgtgacacgattttctcgtgcatctggctgtttaactagacaaaag
gagcagcataccgtctgtcatctttctgtgaaaactcgaggcaatttgtcattcttcata
aataagcaagtgaagtgtgtggtggttggatccctggtgaccacagaccgaacattcaag
ggcctactactgttgagcaggagtcccctggctaaacccatcataaacccaagttacgat
gacttctgtcccagagatttgcccataacttcagaaagtgctgcatcagatgtgaacgaa
tacaatgaagatcaaaagagagccattgagactgcttatgccatggtaaagcaacatcca
gggcttcccaagatctgcctcatccacggtccacctggaacagggaaatcaaaaactatt
gttggacttctgtctcgtgttttgagagaaaacattaggaaggagaagacaactcaaaaa
acaaattccaagatcaagccaaaccgttttctagtttgtgcaccatcaaatgctgctgtt
gatgaactcatgaaaaagatcatcgttgcatttaaggaaaaatgccaaaacagacaggag
cctttgggaaactgtggtgatatcaaattagtgcgacttggagctgaaaaagcaatcaac
agtgaagtccggggatttagcctggataagcaagttgaacatagaatgaaacgaaagcca
gctgactgtgaccaggatattcagaagaaaaaaacagctctggatcaaaagctggacatg
ctgtctcgtcagcgtgccatgtacagatgtgagaagagggaggtgagtcaaatgttagat
gatgaaattggcagactttcaaaggaaagacaacagcttgcttctcaactaaaggaggtt
cggaggcactcgcagaaagtacaggcagatatcatcttggagtccgacattatctgctgc
acgctgagcacaagcggaggaagtctgctggaatctgcttttttgcggcaaggccttgat
cctttcagctgtgtcattgtggatgaggcagggcagtcctgtgaggttgaaacactgatt
ccactgatccaccgctgtaataaacttgttcttgttggagatcccagacagctccctcct
actgtaaaatcagtaaaagctcaggaatatggctacgatcagtccttgatggcacgtctg
cacagacacctggaggagcaagtgcggaagaatgttttacgaagcctgccagttgtgcag
ctgactgtgcagtacaggatgcaccctgacatctgcctcttcccatccaattacgtttat
ggcaggactctaaagactgacaaagcaacagaagagaacagatgttcttcagagtggcca
ttccagccctaccttatttttgatgtaggagatggtcgtgaggagcgagagaatgactct
tttagtaatcctcaggaagtgaagctggtggtggaattaattagaacaattaaagaaaaa
aggaaggatctgggtcttcgtcgcattggaataattaccccttacagcgcacagaaaaag
aaaattcaagaacaactggacagagtgtttaggaataacagcccaggagaagtggacaca
gtggatgcattccagggacgagagaaagactgcatcatagtgacatgcgtccgggcaaac
agcactaaagggtcaattgggtttctggcgagtcttcagcgtctgaacgttacaattacc
cgagccagattcagcctctttatccttggaagactgaaaacgctcatggaaaataaagac
tggaatgaattgattcaggatgctcagaaaagaggtgccattatcaagacatcagaaaaa
agctacaggaaagatgctgttaagattttgaagctcaaggcaacagtacagccctcaacc
aaagcagggacaaagaaatctcctctgttgcaggcttgtccttccagtagcaagaggggt
gagcttgcaaatccaagggaggcccacagctcacgggaactcgctgctggtgctggccat
gcagtgccacaaggaagcagagggccccagcagccacagagggctcaggctgcagactcc
aggagaggcagtgcctccgcaccagtggaggctgcagcgcttcctgctgatcaggagaaa
ccacgggacccaaggctggcaagtatggcgagtagaactgaaacaaaagggaaggagcag
gcctcaaaagacaggagtcggtcagcccagagcaatccaggatcaacgtcacagcaaggc
ctcgatgtgtcctcagctgccaggggtcagatttccagaacagaaactcctaagaagccc
cagcaaacgatggcgcaatgtgacatgccttccacgtcaccttacgcagctcggcacgag
ggtgaccggagagttcctgtatcgaaaagcagttcaaaagcccacagtgaaggaggtcaa
aataatagcagtaagtggaacaaagactatcaagttttagcaaggagaacatcagaggaa
tcaccagagaacacggaatcaaacagtgccaagcgaagaaagacctctcactga
DBGET
integrated database retrieval system
