KEGG   Harpia harpyja (harpy eagle): 128155126
Entry
128155126         CDS       T10541                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hhar  Harpia harpyja (harpy eagle)
Pathway
hhar03440  Homologous recombination
hhar03450  Non-homologous end-joining
hhar04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:hhar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    128155126 (RAD50)
   03450 Non-homologous end-joining
    128155126 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    128155126 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhar03032]
    128155126 (RAD50)
   03400 DNA repair and recombination proteins [BR:hhar03400]
    128155126 (RAD50)
DNA replication proteins [BR:hhar03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    128155126 (RAD50)
DNA repair and recombination proteins [BR:hhar03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     128155126 (RAD50)
    BRCA1-C complex
     128155126 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     128155126 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SMC_N AAA_21 AAA_15 SbcC_Walker_B DUF2703 AAA_29 AAA_24
Other DBs
NCBI-GeneID: 128155126
NCBI-ProteinID: XP_052672651
LinkDB
Position
20:complement(2170807..2194638)
AA seq 1312 aa
MSKIEKMSILGVRSFGVEDKDKQIITFFHPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLESVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHLSNREAQLAASKEN
VKSIESQLDPLKNSLAAVEQNLIKVMRLDNDVKALESRRKQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVREKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITMRDSLIQSLAAQLELDGFERAPFNERHVTSFHRLLKERQERDTEAANRLMREFAQ
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQAELKNVKCELQQLEGFSDRILELDQE
IVKTEHELEKAEKNSNVETLEVEVRTLQNEKINLDKALRKLDQEMEQLNLHTMTITQMEM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHGKNRKINQTRDNLADLNKR
LASVEYHKTYVSNELKKKEEQLSLHEAKLFDVCGSQDFDSDLNKLQVEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRSKIQNANRDLTGLKGEIEEQESLLRTALS
EEDGAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQISSSMQHRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLNATLEKLQQEKEDLMNKRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKEDYKKQKESELDEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIKQLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALMEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYIH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcgaagattgagaagatgagtatcctcggagtgaggagctttggggtagaggataaa
gacaaacaaattatcactttctttcatccgttaactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatacatatccactggagattttcctcctggc
accaaagggaactcatttgttcatgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattacagtttcgtgatgtaaacggagagctcgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaatctgtcattactaga
acaaagcatggcgagaaggtcagtctcagttccaagtgtgcagaaattgatcgagagatg
atcagtgcccttggtgtttccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaagcaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaagcaaagc
ttgaaagtaaaagagtgccagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccagaatcatcttagcaacagagaggctcaactggctgcttctaaggagaat
gtaaaatctattgagagtcaacttgatcctctaaagaattctctggcagcagttgaacag
aatctcataaaagtaatgaggctagacaatgatgtaaaagccttggagagcaggaggaag
cagatggagaaagataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagggatagataccagaaccaccagagaacagtgagggagaaggagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgagaaatcagaactacttattgaacgaggtcgtcttcaactgcaagcagatcgtcac
caagaacacatcacaatgagggattcattaattcagtctttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacgttaccagttttcacaggttgttg
aaggagagacaagaaagagatactgaagctgcaaatcgtttgatgagagaatttgcacaa
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagctgagctgaagaatgta
aaatgtgaattgcagcagttggagggtttttcagacagaattctggagttggaccaggag
attgtcaagacagaacatgagctggagaaggctgagaagaacagcaatgtagaaacactt
gaagtagaagtacgaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttggatcaagagatggaacagttgaatctacataccatgacaattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagatcagaaaagtaaaatcaagacattct
gatgaactgacatcactgttgggatactttccaaataaaaaccaacttgaagactggctt
catggcaaaaatagaaagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcggtagaatatcataaaacttatgtcagtaatgagctaaaaaaaaaagaagag
cagttgtcccttcatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgaacaaacttcaggttgaaattgaaaagagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacaactgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtaatcagtgat
ctgcagtctaagctgcgtcttgctccggacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttaggcgaactgtagtt
gaactccaagatagggacataccagacttgaggagcaagatacagaatgcaaacagggat
ttaacaggcctgaagggtgagatagaagaacaggaatcactcttgcggacagctttatct
gaggaggatggggccaaggcacgtttacaggatataacactaatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccatgaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtgcagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcatcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggtatttcctttgaatgcaactttagaa
aaactgcagcaggagaaggaggatctaatgaacaaaaggactgcaagtaataaagaaacc
caagagaagataaatggcataaaagagaaagttaaggatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagaagactataaaaagcaaaaggagtctgaactt
gatgaagtaaattctcagttagccgcctgcgagaaacagaaggaaaagataagtaaggag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggttagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatataaaacaa
cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaagaatgaacagaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggtcgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggaaaagtacagggagatgatgattgttatgagaacaacagagctagtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaatccgttctgatgcagatgagaatgtctcagcctctgataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgccctgatggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcatgatgaagattttgttgaacttctgggccgttct
gaatacgtggaaacattctacaggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagcgtcagctccctaggctcatacattcattag

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