Harpia harpyja (harpy eagle): 128155126
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Entry
128155126 CDS
T10541
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03440
Homologous recombination
hhar03450
Non-homologous end-joining
hhar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128155126 (RAD50)
03450 Non-homologous end-joining
128155126 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128155126 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhar03032
]
128155126 (RAD50)
03400 DNA repair and recombination proteins [BR:
hhar03400
]
128155126 (RAD50)
DNA replication proteins [BR:
hhar03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
128155126 (RAD50)
DNA repair and recombination proteins [BR:
hhar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
128155126 (RAD50)
BRCA1-C complex
128155126 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
128155126 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_21
AAA_15
SbcC_Walker_B
DUF2703
AAA_29
AAA_24
Motif
Other DBs
NCBI-GeneID:
128155126
NCBI-ProteinID:
XP_052672651
LinkDB
All DBs
Position
20:complement(2170807..2194638)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFHPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLESVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHLSNREAQLAASKEN
VKSIESQLDPLKNSLAAVEQNLIKVMRLDNDVKALESRRKQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVREKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITMRDSLIQSLAAQLELDGFERAPFNERHVTSFHRLLKERQERDTEAANRLMREFAQ
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQAELKNVKCELQQLEGFSDRILELDQE
IVKTEHELEKAEKNSNVETLEVEVRTLQNEKINLDKALRKLDQEMEQLNLHTMTITQMEM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHGKNRKINQTRDNLADLNKR
LASVEYHKTYVSNELKKKEEQLSLHEAKLFDVCGSQDFDSDLNKLQVEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRSKIQNANRDLTGLKGEIEEQESLLRTALS
EEDGAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQISSSMQHRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLNATLEKLQQEKEDLMNKRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKEDYKKQKESELDEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIKQLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALMEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYIH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaagatgagtatcctcggagtgaggagctttggggtagaggataaa
gacaaacaaattatcactttctttcatccgttaactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatacatatccactggagattttcctcctggc
accaaagggaactcatttgttcatgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattacagtttcgtgatgtaaacggagagctcgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaatctgtcattactaga
acaaagcatggcgagaaggtcagtctcagttccaagtgtgcagaaattgatcgagagatg
atcagtgcccttggtgtttccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaagcaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaagcaaagc
ttgaaagtaaaagagtgccagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccagaatcatcttagcaacagagaggctcaactggctgcttctaaggagaat
gtaaaatctattgagagtcaacttgatcctctaaagaattctctggcagcagttgaacag
aatctcataaaagtaatgaggctagacaatgatgtaaaagccttggagagcaggaggaag
cagatggagaaagataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagggatagataccagaaccaccagagaacagtgagggagaaggagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgagaaatcagaactacttattgaacgaggtcgtcttcaactgcaagcagatcgtcac
caagaacacatcacaatgagggattcattaattcagtctttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacgttaccagttttcacaggttgttg
aaggagagacaagaaagagatactgaagctgcaaatcgtttgatgagagaatttgcacaa
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagctgagctgaagaatgta
aaatgtgaattgcagcagttggagggtttttcagacagaattctggagttggaccaggag
attgtcaagacagaacatgagctggagaaggctgagaagaacagcaatgtagaaacactt
gaagtagaagtacgaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttggatcaagagatggaacagttgaatctacataccatgacaattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagatcagaaaagtaaaatcaagacattct
gatgaactgacatcactgttgggatactttccaaataaaaaccaacttgaagactggctt
catggcaaaaatagaaagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcggtagaatatcataaaacttatgtcagtaatgagctaaaaaaaaaagaagag
cagttgtcccttcatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgaacaaacttcaggttgaaattgaaaagagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacaactgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtaatcagtgat
ctgcagtctaagctgcgtcttgctccggacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttaggcgaactgtagtt
gaactccaagatagggacataccagacttgaggagcaagatacagaatgcaaacagggat
ttaacaggcctgaagggtgagatagaagaacaggaatcactcttgcggacagctttatct
gaggaggatggggccaaggcacgtttacaggatataacactaatggaaaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccatgaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtgcagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcatcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggtatttcctttgaatgcaactttagaa
aaactgcagcaggagaaggaggatctaatgaacaaaaggactgcaagtaataaagaaacc
caagagaagataaatggcataaaagagaaagttaaggatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagaagactataaaaagcaaaaggagtctgaactt
gatgaagtaaattctcagttagccgcctgcgagaaacagaaggaaaagataagtaaggag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggttagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatataaaacaa
cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaagaatgaacagaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggtcgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggaaaagtacagggagatgatgattgttatgagaacaacagagctagtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaatccgttctgatgcagatgagaatgtctcagcctctgataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgccctgatggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcatgatgaagattttgttgaacttctgggccgttct
gaatacgtggaaacattctacaggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagcgtcagctccctaggctcatacattcattag
DBGET
integrated database retrieval system