Halobacterium hubeiense: Hhub_1010
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Entry
Hhub_1010 CDS
T04202
Symbol
polD1
Name
(GenBank) DNA-directed DNA polymerase D exonuclease subunit DP1
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hhub_1010 (polD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhb03032
]
Hhub_1010 (polD1)
Enzymes [BR:
hhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hhub_1010 (polD1)
DNA replication proteins [BR:
hhb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
Hhub_1010 (polD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Colicin_M
Motif
Other DBs
NCBI-ProteinID:
CQH43774
UniProt:
A0A0U5GXV3
LinkDB
All DBs
Position
I:7290..8960
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AA seq
556 aa
AA seq
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MPREPPVRVVRELTSRGYNAEREAVTLLAGASDPAAAVERAVDAAPDDALTLTTDHVREV
VDDATPNASDSEADASGGDAPTAPTETAAAATATQSADPGPEAPTDETASATASTGATDD
DIQPTESTTPVETKGVSEGQNAAGRRDGRDARDDSQRSVEIDGDITGESTGTGEYADFVA
TFRDRYDRLSKKLRGRVNHRPTDALDSMPGGSEAAVVGMVNDVRSTASGHWLVEVEDTNG
VFPTLVMKDRDIADHVDELLTDEVIAVEGTISDDGGILFADELHFPDIPRTHSASTADRH
VQAALVSDVHVGSQEFAADAWQAFADWLHTEEADPVEYLLIAGDMVEGVGVYPDQDEELD
IVDIYEQYETFAEHLKDVPGDMEIVMIPGNHDAVRLAEPQPAFDEELRSIMSAHDARFTG
NPSTVTVEGVDVLMYHGVSIDEIIAEYPGDDISYDNPHRAMEQLLKKRHVAPQFGGRTRV
APEKEDYLVIDDAPDVFHTGHVHKLGVGGYHNVRLVNSGCWQHQTEFQKSVNIDPDVATA
PILDLDTLDVTVRKFA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgagaacccccggtccgggtcgtccgcgaactcaccagccgggggtacaacgcg
gaacgcgaggccgtgacgctgctcgcgggcgccagcgaccccgcggccgccgtcgagcgc
gcggtcgacgccgcgcccgacgacgcgctgacgctgaccaccgaccacgtccgcgaggtg
gtcgatgacgcgacgccgaacgcctcggacagcgaggccgacgcgtcgggcggcgacgcg
ccgaccgctccgaccgaaactgccgcggccgctaccgccacgcagtccgccgaccccggg
ccggaagcgcccaccgacgagacggcttccgccaccgcttcgactggagccacagacgac
gatatccagccgacagagagcactactccagttgaaacgaagggggtaagcgaggggcag
aacgcggcggggcggcgggacggccgcgacgcccgcgacgacagccagcgcagcgtcgaa
atcgacggcgacatcaccggcgaatcgacggggaccggcgagtacgcggacttcgtcgcg
acgttccgcgaccgctacgaccgcctctcgaagaaactccgcggccgcgtcaaccaccgg
ccgacggacgcgctcgactcgatgcccggcggcagcgaggccgcggtcgtcggtatggtc
aacgacgtccgctcgaccgccagcggccattggctcgtcgaggtcgaggacacgaacggc
gtcttcccgacgctcgtgatgaaagaccgcgacatcgccgaccacgtcgacgaactcctc
acggacgaggtcatcgccgtcgaagggacgatttcggacgacggcggcatcctgttcgcg
gacgaactccacttcccggacattccccgcacccacagcgcatcgaccgcggaccgacac
gtgcaggccgcgctcgtctccgacgtccacgtcggcagccaggagttcgccgcggacgcg
tggcaggcgttcgccgactggctccacaccgaggaggccgaccccgtcgagtacctcctc
atcgcgggcgacatggtcgagggcgtcggcgtctaccccgaccaggacgaggaactggac
atcgtcgacatctacgagcagtacgagacgttcgcggagcacctcaaagacgtccccggg
gacatggagatcgtgatgattcctggcaaccacgacgccgtccgcctcgcggaaccccag
cccgccttcgacgaggagctgcgctcgattatgagcgcccacgacgcccgcttcaccggg
aacccctccacggtcaccgtcgagggcgtcgacgttctgatgtaccacggcgtctccatc
gacgaaatcatcgccgagtaccccggcgacgacatctcctacgacaacccccaccgcgcg
atggagcaactgctgaagaagcgccacgtcgccccgcagttcggcggccgcacccgcgtc
gcccccgagaaggaggactacctcgtcatcgacgacgcgcccgacgtcttccacaccggc
cacgtccacaagctcggcgtcggcggctaccacaacgtccgcctcgtgaactcggggtgc
tggcaacaccagacggagttccagaagtccgtcaacatcgaccccgacgtcgccaccgca
cccatcctcgacttggacacgctggacgtgaccgtccgcaagttcgcttag
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