Halobacterium hubeiense: Hhub_1023
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Entry
Hhub_1023 CDS
T04202
Name
(GenBank) homolog to DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhb03032
]
Hhub_1023
03400 DNA repair and recombination proteins [BR:
hhb03400
]
Hhub_1023
Enzymes [BR:
hhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hhub_1023
DNA replication proteins [BR:
hhb03032
]
Prokaryotic type
DNA Topoisomerases
Hhub_1023
DNA repair and recombination proteins [BR:
hhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hhub_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
HypA
Zn_ribbon_4
Zn_ribbon_FGT1_1
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CQH43980
UniProt:
A0A0U5H0G6
LinkDB
All DBs
Position
I:24698..25450
Genome browser
AA seq
250 aa
AA seq
DB search
MQDAIRVLAGECAVRYESDGRTERDLRGDVVVIVKPDDTVLVHDADGYQPAAWLTRPGVV
RYTRDARGFRIDAADGDERLVVESATEHGDAHYPASPAGPPVGTCECDGTLVRDGGRVVC
IDCRTSYAIPRDAAVVDEPCPDCGLPQLRVERGGEVTACLDRDCTPIADVVAERFDGAWA
CRCGAPLEIEADRGLHAACPDCDASYRLPRGTVDGTCECGLPAFETPSGPRCLDGDCGQA
LTAGGRDRNS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcgattcgcgtgctcgctggcgagtgtgccgtccgctacgagagcgacggt
cgaaccgaacgcgacctccgcggtgacgtcgtcgtcatcgtgaaacccgacgacaccgtg
ctcgtccacgacgcggacggctaccagcccgcggcgtggctcacgcgcccgggcgtcgtc
cggtacacgcgggacgcccgcgggttccgcatcgacgcggcggacggcgacgagcggctc
gtcgtggagagcgcgaccgagcacggcgacgcccactatcccgcgtcgcccgccgggccg
ccggtcggcacgtgcgagtgcgacggcacgctcgtcagggacggcgggcgcgtcgtctgc
atcgactgccggacgagctacgcgattccgcgggacgccgccgtcgtggacgagccctgt
ccggactgcgggctcccccagttgcgggtggagcgcggcggcgaggtgacggcgtgtctg
gaccgcgactgcacgcccatcgccgacgtcgtcgccgagcgcttcgacggcgcgtgggcg
tgtcggtgtggcgcgccactcgaaatcgaggccgaccggggcctccacgcggcctgtccg
gactgcgacgccagctaccggctgccccgcgggaccgtggacggcacctgcgagtgcgga
ctaccggccttcgagacgccgagcgggccgcgctgtctcgacggcgactgcgggcaggca
ctgaccgcgggcgggcgcgaccgcaacagttga
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integrated database retrieval system
