Halobacterium hubeiense: Hhub_1024
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Entry
Hhub_1024 CDS
T04202
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhb03016
]
Hhub_1024 (endA)
Enzymes [BR:
hhb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Hhub_1024 (endA)
Transfer RNA biogenesis [BR:
hhb03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Hhub_1024 (endA)
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
bL9m_N
Motif
Other DBs
NCBI-ProteinID:
CQH44005
UniProt:
A0A0U5CUN7
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All DBs
Position
I:25476..26507
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AA seq
343 aa
AA seq
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MDGELHGDEVRVGGDARQRFHDARGYGHPLDGNAIALSVVEAAHLLFRGDLDAVDGAGFR
DFFADRGAGFAARFLVYADLRDRGFYLAPDRQPWWDDPGDGDFVVFPRGKGPGDGVVKHR
IRVVDERATIPAGDLGDVVLAVVDEESEITYLDVTATEPDGDTDFTPPTDVRGTLLEDRV
LVWDAPGELHEQGFYGQPLGGRAAEYDALQLSLLEAAYLAAQGVLDLGDDDVEAVVERGR
AGEADRFDRRLRVYRALRDRGMVPKTGFKFGADFRVYSEVESVDDLGHSELLVRVLPDDV
VFAPRDLSLDVRLAHGVRKRMVFALDNPSADTIRWLSVSRLTP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgagctacacggcgacgaggtccgggtcggcggcgacgcccgccagcggttc
cacgacgcccgcggctacggccacccgctcgacggcaacgccatcgcgctgtcggtcgtg
gaggccgcccacctgctgttccgcggcgacctcgacgccgtcgacggcgcggggttccgg
gactttttcgccgaccgcggcgccggcttcgccgcgcgcttcctcgtctacgcggacctc
cgcgaccgcggcttctacctcgcgcccgaccgccagccgtggtgggacgacccgggcgac
ggcgacttcgtcgtgttcccgcgcgggaaggggcccggcgacggcgtcgtgaaacaccgg
attcgcgtcgtcgacgagcgcgcgaccatccccgccggcgacctcggcgacgtcgtgctc
gcggtcgtcgacgaggagagcgaaatcacgtacctcgacgtgaccgccaccgagcccgac
ggcgacaccgacttcaccccgccgacggacgtccgcggcacgctgctcgaagaccgcgtg
ctcgtctgggacgcgcccggcgaactccacgaacaggggttctacgggcagccgctcggc
ggccgcgcggccgagtacgacgcgctccagctctcgctgctggaggccgcgtacctcgcc
gcgcagggcgtcctcgacctcggggacgacgacgtcgaggcggtcgtcgagcgcggccgc
gcgggcgaggccgatcgcttcgaccgccggctgcgcgtctaccgggcgctgcgcgaccgc
gggatggtccccaagaccgggttcaagttcggcgcggacttccgcgtgtacagcgaggtc
gagtccgtcgatgacctcgggcactcggagttgctcgtgcgcgtgctccccgacgatgtc
gtgttcgcgccgcgggacctctcgctggacgtgcgcctcgcccacggggtccggaagcga
atggtttttgcgctcgacaatcccagtgcggacacgattcgctggctctccgtgagcagg
ctcactccctaa
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