Halobacterium hubeiense: Hhub_1250
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Entry
Hhub_1250 CDS
T04202
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hhub_1250 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_1250 (rpoA1)
Enzymes [BR:
hhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hhub_1250 (rpoA1)
Transcription machinery [BR:
hhb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hhub_1250 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_31
HTH_24
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CQH46664
UniProt:
A0A0U5GZT7
LinkDB
All DBs
Position
I:248940..251852
Genome browser
AA seq
970 aa
AA seq
DB search
MSTGQSPMEIGEISFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGQRSGSCNGHFGHIELAAPVIHVGFAKLIRRLLRGTCRDCARLLLTEEEKEEYRE
DLDRTRSLREDVSDVTKAAIREARKKDHCPHCGEVQYDVKHEKPTTYYEVQQVLASDYSE
RIAAAMQPDPDEDDSGISPQELAEQTDIEISRINDILSGEFRPRREDREAIEAAIGADLT
TEDMNKLMPSDIRDWFEDIPGEDLAVLGIDPDKSRPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVATEMT
QTMVVNEQNVERARTYVRNGPEGHPGANYVTRPDGRRVRVTEKVCEELAERVEPGWEVQR
HLIDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHDNPRFNETQASDLLRQTS
IDELPEPAGTEDGEPYWEGRQIFSELLPDDLNLDFTGTVGEPVVIENGQLLEGTIAEDEI
GGFGGEIVDTIAKVHGKTRARIFINEVASLAMRSIMHFGFSIGIDDETVSTEARERIDEA
IGSAYDRVQELIETYENGDLESLPGRTVDETLEMKIMQTLGKARDSAGDVAAENFDSDNP
AVVMADSGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHFEPNDLSSEAHGFVEN
SYTSGLTPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDT
IVQFEFGEDGTSPVEVSSNEEVDVDVEHIADRIIESEFDSTEEKEAFLGVQEPPTNLSEH
GASWEVESDD
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggacaatcacccatggaaatcggggaaatcagcttcgggctgatggacccg
gaggagtaccgggacatgtccgcgacgaaagtcatcaccgcggacacgtacgacgacgac
ggcttccctatcgacatggggctgatggacccccgcttgggcgtcatcgaccccgggctg
gagtgcaagacgtgcggccagcgctccgggagctgtaacggccacttcggccacatcgag
ctcgctgcgcccgtcatccacgtcggattcgcgaagctcatccgccggctgctgcgcggg
acgtgtcgggactgcgcgcgcctcctgctcaccgaggaggagaaagaggagtaccgcgag
gacctcgaccgcacgcgcagcctccgcgaggacgtctccgacgtcacgaaggccgccatc
cgggaggcccgcaagaaggaccactgcccgcactgcggggaagtccagtacgacgtcaag
cacgagaagccgacgacgtactacgaagtccagcaggtcctcgccagcgactacagcgag
cgcatcgcggccgcgatgcagcccgaccccgacgaggacgactcgggcatcagcccgcag
gagctcgccgagcagacggacatcgagatcagccgcatcaacgacatcctctccggggag
ttccggccgcgccgcgaggaccgcgaggccatcgaggccgccatcggcgcggacctcact
accgaggacatgaacaagctgatgccctcggacatccgcgactggttcgaggacatcccc
ggagaggacctcgccgtgctcggcatcgaccccgacaagagccggcccgagtggatgatt
ctcacagtgctgccggtccccccggtgaccgctcggccgtccattacgctggacaacggc
cagcgcagcgaggacgacctcacgcacaagctggtggacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaggcgggcgcgccccagctcatcatcgaggacctctgggagctg
ctgcagtaccacgtcacgacgttcatggacaacgagatttcgggaacgccgcccgcccgc
caccgttcggggcgcccgctgaagacgctcagccagcgcctcaagggcaaggaggggcgg
ttccgcggctcgctgtccgggaagcgcgtgaacttctccgcgcggaccgtcatcagtccg
gacccgacgctgtcgctgaacgaggtcggcgtgcccgaccgcgtggcgaccgagatgacc
cagacgatggtcgtcaacgagcagaacgtcgaacgcgcccgcacgtacgtccgcaacggc
cccgagggccacccgggcgcgaactacgtcacgcgacccgacggccgccgcgtgcgcgtc
accgagaaggtctgcgaggagctcgccgagcgcgtcgagcccggctgggaggtccagcgc
cacctcatcgacggcgacatcatcatcttcaaccggcagccgtcgctgcaccggatgtcc
atcatggcccacgaggtcgtggtgatgccgtacaagacgttccgcctgaacaccgtcgtc
tgtccgccgtacaacgccgacttcgacggcgacgagatgaatatgcacgccctccagaac
gaggaggcgcgggcggaggcgcgcgtgctgatgcgcgtccaggagcagattctctcgccg
cgcttcggtgagaacatcatcggcgcgattcaggaccacatcagcgggacgtacctgctc
acgcacgacaacccccgcttcaacgagacgcaggcctccgacctgctgcgccagaccagc
atcgacgagctccccgagcccgccggcaccgaggacggcgagccctactgggagggccga
cagatcttcagcgaactactgcccgacgacctcaacctcgacttcacggggacggtcggc
gagccggtcgtcatcgagaacggccagctcctcgaaggcaccatcgccgaggacgaaatc
ggtgggttcggcggcgaaatcgtcgacaccatcgcgaaggtccacgggaagacccgcgcg
cgcatcttcatcaacgaagtcgcgtcgctggcgatgcgctcgatcatgcacttcgggttc
tccatcggcatcgacgacgagaccgtctccacggaggcccgcgagcgcatcgacgaggcc
atcgggtcggcgtacgaccgcgtgcaggaactcatcgagacctacgagaacggcgacctc
gagtccctgcccggccgcaccgtcgacgagaccctcgagatgaagatcatgcagacgctc
gggaaggcccgcgactccgccggcgacgtcgccgcggagaacttcgactcggacaacccc
gcagtcgtcatggccgactccggcgcgcgtgggtcgatgctgaacctcacgcagatggcc
ggctgcgtcggccaacaggcagtccgcggcgagcgcatcaaccgcggctacgaggaccgc
acgctcagccacttcgagccgaacgacctctccagtgaagcccacggcttcgtggagaac
tcctacacgagcgggctcacgcccaaggagttcttcttccacgcgatgggcggccgcgag
gggctggtggacacggcagtccgcacctcgaagtccggctacctccagcgccgcctcatc
aacgcgctctccgagctggagacccagtacgacggcacggtccgcgacaccagcgacacc
atcgtccagttcgagttcggcgaggacggcacctcgcccgtcgaggtgtcctccaacgag
gaggtcgatgtcgacgtcgaacacatcgccgaccgcatcatcgaatccgagttcgactcc
acggaggagaaagaggccttcctcggcgtgcaggagccgccgacgaacctctccgaacac
ggcgcgtcctgggaggtggaatccgatgactga
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