Halobacterium hubeiense: Hhub_1398
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Entry
Hhub_1398 CDS
T04202
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhb03016
]
Hhub_1398 (truD)
Enzymes [BR:
hhb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Hhub_1398 (truD)
Transfer RNA biogenesis [BR:
hhb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hhub_1398 (truD)
Prokaryotic type
Hhub_1398 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CQH48264
UniProt:
A0A0U5AB24
LinkDB
All DBs
Position
I:complement(386916..388220)
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AA seq
434 aa
AA seq
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MREAHELERAVGMWYYASDSDGTGGRLRESPSDFRVTEIEEFDTQPVDADRGDYPWLVLR
ATLTSWDTNDFARELANGLEMSRERVTWAGTKDRHAVTTQLFAVRDVVPEDLPDISDAGI
DVVGRAGRGLEFGDLAGNEFRVVVRDPDDPGQAEAVTADLAAFGGGEPGVPNYFGQQRFG
SKRPVTHEVGLAILRGDWEGAAMAYLGAPSEHEPEDSSRARRFVEDTRDWEAALEKFPNR
LRYERTMLHELADGGSFRDAVETFPSNLQRLFVHAAQSYAFNRMLAERMERGLPFHEPVE
GDVVWFAESDVPESVARPDSSRQQRVTADRVDVMARHCARGRAFVTAPLVGTDTELAEGE
PGEIERAVLGELDLEPGDFDLPGEFDSSGTRRAILLRPDLTVERDPLTFEFALPSGSYAT
VVLREYLKTSPLDL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcccacgaattggagcgcgcggtcgggatgtggtactacgccagcgacagc
gacggcacgggcggccgcctccgcgagtcgccgtcggacttccgcgtcacggaaatcgag
gagttcgacacccagcccgtggacgccgaccgcggcgactacccgtggctcgtcctgcgc
gcgacgctgacgtcgtgggacaccaacgacttcgcccgcgagctcgcgaacggcctagag
atgagccgcgagcgcgtgacgtgggcggggacgaaagaccgccacgcggtcaccacccag
ctgttcgccgtccgcgacgtcgtgcccgaggacctccccgacatctcggacgcgggcatc
gacgtcgtcgggcgcgcgggccgcggactggagttcggcgacctcgcgggcaacgagttc
cgcgtcgtcgtccgcgaccccgacgaccccgggcaggcggaggccgtcaccgcggacctc
gcggcgttcggcggcggcgagccgggcgttccaaattacttcggccagcagcgcttcggc
agcaagcgcccggtcacccacgaggtcgggctcgccatcctgcgcggcgactgggagggc
gccgcgatggcgtacctcggcgcgcccagcgagcacgaaccggaggatagcagtcgcgcg
cggcggttcgtcgaggacacccgcgactgggaggccgccctagagaagttcccgaaccgg
ctgcgctacgagcgcacgatgctgcacgagctggcggacggcgggagcttccgggacgcc
gtcgagacgttcccgtcgaacctccagcggctgttcgtccacgccgcccaatcgtacgcg
ttcaaccggatgctcgccgagcgcatggagcgcgggctgccgttccacgagcccgtcgag
ggcgacgtggtgtggttcgcggagtcggacgtccccgagagcgtcgcccggccggattcg
agccgccagcagcgcgtcaccgccgaccgcgtggacgtgatggcgcgccactgcgcccgc
ggccgggcgttcgtcaccgcgccgctggtcggcaccgacaccgagttggcggaaggagaa
cccggggaaatcgagcgcgccgtgctcggcgaactcgacctcgaacccggggacttcgac
ctcccgggcgagttcgactcctcggggacgcggcgcgcaattttgctccgccccgacctc
acggtcgaacgcgaccccctgaccttcgagttcgcgctcccctccgggagctacgcgacg
gtcgtcctgcgcgagtacctgaaaacgagtccgctggacctctga
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