Halobacterium hubeiense: Hhub_1411
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Entry
Hhub_1411 CDS
T04202
Symbol
tfbA1
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hhub_1411 (tfbA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_1411 (tfbA1)
Transcription machinery [BR:
hhb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hhub_1411 (tfbA1)
Prokaryotic type
Archaeal type
TFB
Hhub_1411 (tfbA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_ribbon_IS1595
Zn_ribbon_8
Lar_restr_allev
zf-tcix
Zn_Ribbon_YjdM
Sigma70_r4
Cas12f1-like_TNB
Zn_ribbon_Top1
Cyclin_N
Cyclin_C
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
CQH48391
UniProt:
A0A0U5GY05
LinkDB
All DBs
Position
I:complement(398864..399826)
Genome browser
AA seq
320 aa
AA seq
DB search
MTRSTRQRERETATEQEESEEGVRECPECGSDNLVKSSDRAELVCNDCGLVVEEEQIDPG
PEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVA
TSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYVPRFCS
ELELSEEVQAKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIHS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccactcgccagcgggagcgagaaacggcgacagagcaggaggagtccgag
gagggcgtacgggagtgcccggagtgcggctctgacaacctcgtgaagagctcggaccgc
gcggagctggtctgcaacgactgcggcctcgtcgtcgaggaggagcagatcgaccccggt
ccggagtggcgcgcgttcaaccaccaggaacgacaggagaagtcccgcgtcggtgcaccg
accacgcagacgatgcacgacaaggggctgacgacgaccatcgactggaaggacaaggac
gcctacgggcgttccatctcgtcgaagaagcgctcgcagatgcaccgcctgcggaagtgg
caggagcgcatccgcacgaaggacgccggcgagcgcaacctccagttcgcgctctcggaa
atcgaccggatggcgtcggcgctcggcgtcccgcggtcggtgcgggaggtcgcgtcggtc
atctaccggcgcgcgctcaaggaagacctcattcgtggccgctccatcgagggcgtcgcg
acgagcgcgctgtacgcggcctgccggaaggaaggcatcccccggagcctcgaggagatt
tcggaggtgtcccgggtcgagcgcaaggagatcggtcgcacgtatcgctacatctctcag
gagctcggactggagatgaagcccgtcgacccgaagaagtacgtgccccggttctgctcg
gaactcgaactctccgaggaagtgcaggcgaaagccaacgagatcatcgagacgaccgcc
gagaagggactgctctcgggcaagtccccgaccggctacgcggccgccgcaatctacgcc
gcgtccctgctctgcaacgagaagaagacccagcgcgaggtcgcggacgtcgcgcaggtg
acggaagtcaccatccggaaccgctaccaggagcagatcgaggcgatgggcatccacagt
tag
DBGET
integrated database retrieval system
