Halobacterium hubeiense: Hhub_1512
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Entry
Hhub_1512 CDS
T04202
Symbol
fdfT
Name
(GenBank) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hhb
Halobacterium hubeiense
Pathway
hhb00100
Steroid biosynthesis
hhb00909
Sesquiterpenoid and triterpenoid biosynthesis
hhb01100
Metabolic pathways
hhb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Hhub_1512 (fdfT)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Hhub_1512 (fdfT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hhb01006
]
Hhub_1512 (fdfT)
Enzymes [BR:
hhb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Hhub_1512 (fdfT)
Prenyltransferases [BR:
hhb01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Hhub_1512 (fdfT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF7108
DUF6891
UBA_HOIP
Herpes_BLRF2
DUF4726
Motif
Other DBs
NCBI-ProteinID:
CQH49334
UniProt:
A0A0U5H0I3
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All DBs
Position
I:489927..490973
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AA seq
348 aa
AA seq
DB search
MVGGQQSPQPAADERAWCHDAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVEDA
TSIPPAEQAELLRTYDSVLDPADETGVAAFREDVEPHLPAELDADWTVVAEAPRVLRAFE
SLDADAQAAIRPTVREMTTGMASFVERYADDGGLRIQSVEELEEYCWYVAGTVGELVTEL
LAADAAREDAATMREHARSFALLLQLVNVAKDVRPDYHEENNVYLPASWLDEAGVEPEAV
ADPSNAAGVGNVVERVVDRARGYADGAQRWLEAMPTTSGNTLAAWTVPYLLAVGTMRELR
DRPGDVVEDGDVKVSRAEVHAVLARVTGDFDRAALDRLRERIATQSLA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaggccaacagtccccacagcccgcggccgacgagcgcgcgtggtgccacgac
gccgtgcaggacgtctcccgcacgttcgcgttgactatcgacgcgctcgaagagccgatg
gcgacccgcatctgcgtcggctacctgctgtgccgggttgccgacaccgtcgaggacgcc
acgtcgataccgcccgccgagcaggccgaactcctgcggacgtacgacagcgtgctcgac
cccgccgacgagaccggggtcgcggcgttccgcgaggacgtggagccgcacctgccggcc
gaactggacgccgactggacggtcgtcgcggaggcgccccgcgtcctgcgggcgttcgag
agcctcgacgcggacgcgcaggccgcgattcggccgaccgtccgcgagatgaccacgggg
atggcgtcgttcgtggagcggtacgccgacgacggcggcctccgcatccagtccgtcgag
gagctagaggagtactgctggtacgtggccgggaccgtgggggagctggtcacggagctg
ctggcggcggacgccgcccgcgaagacgcggcgacgatgcgcgagcacgcgcggtcgttc
gccctcctcctccagctcgtgaacgtcgcgaaggacgtccggccggactaccacgaggag
aacaacgtctacctgccggcgtcgtggctggacgaggcgggcgtcgagcccgaggcggtg
gcggacccgtcgaacgcggccggcgtgggcaacgtcgtcgagcgcgtcgtcgaccgcgct
cgggggtacgccgacggcgcgcagcggtggctggaggcgatgccgacgactagcgggaac
acgctggcggcgtggacggtgccgtacctgctggcggtcgggacgatgcgcgagctccgc
gaccgacccggggacgtcgtcgaggacggcgacgtgaaggtctcgcgggcggaagtccac
gcggtgctggcgcgggtcacgggcgacttcgaccgcgcggcgctggaccgcctgcgcgag
cgcatcgccacccagtcgctggcctga
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