Halobacterium hubeiense: Hhub_1801
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Entry
Hhub_1801 CDS
T04202
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hhb
Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhb03400
]
Hhub_1801 (rad50)
DNA repair and recombination proteins [BR:
hhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hhub_1801 (rad50)
Archaeal homologous recombinant proteins
Hhub_1801 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_13
AAA_21
AAA_29
DUF1664
AAA_27
ABC_ATPase
MscS_porin
CENP-F_leu_zip
Mod_r
Crescentin
Phage_GP20
MukB
COG6_N
Uso1_p115_C
ZnF_RZ-type
ATG14
BLOC1_2
Snapin_Pallidin
ABC_tran
FapA
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
CQH52040
UniProt:
A0A0U5H2H5
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All DBs
Position
I:complement(747283..749946)
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AA seq
887 aa
AA seq
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MRFTRVSLRNFKCYEDADVRLDRGVTVIHGLNGSGKSSLLEACFFALYGASALDKTLDEI
VTIGAEEAEIDLWFTHAGNDYHVHRRVRNTGERASTPDCTLETPSGSIDGVTDVEDYVGD
LLRMDAEAFVNCAYVRQGEVNKLINASPSTRQDMLDDLLQLGKLEDYRQRAGDARLGVED
VKSNVAGKLDQLDEQIEAKESENPHDTLASLQSELTDVTEEIENFEDQRETARETLEDAE
SVLEAYEEKRAELADVEETISDVREAIAETESEREELADEIAEHRERADDLEAEAEELVA
ETELDEADAEAAEAKREELAEEREAVTERVSEVAPEVSQFSTEADNAAERADDLEERAAD
LRAEADELESEADELDAEREEAVERIAELDEEVAEAKAAFEDAPVEFGNAEAHLESLNAD
LDDLRKRREGVRADLQSAEDRVEEAEQLLDAGKCPECGQPIEGSPHVESVEEYRERVADL
EAELETIEEDVEDVTERIDRAEGLVEREREVADLQRNRELAVERRDDRADAASEARADAE
AKREQADDLEAEAEGAREEAEEKREQAEDKREALAELNAEQSSLKERVERLADLVDVLAE
AADHRETADQLAEKRASLDDRNDERRDRLSDLRERKQSLEADFDEDRIEAAKEDKERAED
YLEQVEPKLEDLRERRDELQGQIGAAENAIEELEALREQRETVAARLDELQEIHDEVAEL
EATYGDLRAELRQQNVAKLERLLNETFELVYQNDSYARIELSGDYELTVYQKDGEPLEPE
QLSGGERALFNLSLRCAIYRLLAEGIDGEAPLPPLILDEPTVFLDSGHVSQLVELVEQMR
RMGVEQIVVVSHDDELVDAADDVVRVEKDATTNRSRVVRDAEEVLAD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttcacgcgcgtctccctgcggaacttcaagtgctacgaggacgcggacgtgcgc
ctcgaccgcggggtcacggtcatccacgggctgaacggcagcgggaagtccagcctgctg
gaggcgtgtttcttcgcgctgtacggcgcgtccgcgttagacaagacgctggacgaaatc
gtcaccatcggcgcggaggaagccgaaatcgacctctggttcacgcacgccggcaacgac
taccacgtccaccgccgcgtgcggaacaccggcgagcgcgcctcgacgccggactgcacg
ctcgaaacgccctctgggagcatcgacggcgtcaccgacgtcgaggactacgtcggcgac
ctgctgcggatggacgcggaggcgttcgtgaactgcgcgtacgtccggcagggcgaggtg
aacaagctcatcaacgcgtcgccgagcacccggcaggacatgctcgacgacctcctccaa
ctcgggaagctggaggactaccgccagcgcgccggcgacgcgcggctcggcgtggaggac
gtcaagagcaacgtcgcggggaagctcgaccagctggacgagcaaatcgaggccaaagaa
tccgagaatccccacgacacgctggcgagcctgcagtccgaactcacggacgtcaccgag
gaaatcgagaacttcgaggaccagcgcgagaccgcacgcgagacgctcgaagacgccgag
agcgtgctggaggcctacgaggagaagcgcgcggaactcgccgacgtggaggagacgatt
agcgacgtccgggaggcaatcgcggagaccgagagcgagcgcgaggagctcgccgacgaa
atcgccgagcaccgcgagcgggccgacgacctcgaagccgaggccgaggagctggtcgcg
gagaccgaactggacgaggccgacgccgaggccgcggaagcgaagcgcgaggaactcgcc
gaagagcgcgaggccgtcaccgagcgcgtctcagaggtcgcgcccgaggtctcgcagttc
tcgacggaggccgacaacgccgccgagcgcgccgacgacctcgaagaacgcgctgcggac
ctccgcgcggaggccgacgaactcgagagcgaggccgacgaactcgacgccgagcgcgag
gaggccgtcgagcgcatcgcggagctggacgaggaagtcgccgaggcgaaggcggccttc
gaggatgcacccgtggagttcgggaacgccgaggcgcacctcgaatccctgaacgcggac
ctcgacgacctccggaagcgccgggagggcgtgcgcgcggacctccagtccgcggaggac
cgcgtcgaggaggccgaacagctactggacgccgggaagtgcccggagtgcggccagcct
atcgaggggtcgccgcacgtcgagagcgtcgaggagtaccgcgagcgcgtcgcggacctc
gaagccgaactggagaccatcgaggaggacgtcgaggacgtcaccgagcgcatcgaccgc
gcggagggactcgtggagcgcgagcgcgaggtcgcggacctccagcgcaaccgcgagctg
gcggtcgagcgccgcgacgaccgcgcggacgccgcgagcgaagcgcgcgcggacgccgaa
gcgaagcgcgagcaggccgacgacctcgaagccgaggccgagggcgcccgcgaggaagcc
gaggaaaagcgcgagcaggccgaggacaaacgcgaggcgctcgcggagttgaacgccgag
cagtcgtcgctcaaggagcgcgtcgagcggctggcggacctcgtggacgtgctggcggag
gccgccgaccaccgcgagaccgccgaccagctcgcggagaagcgcgcgagccttgacgac
cgcaacgacgagcgccgcgaccgcctgagcgacctccgcgagcgcaagcagtcgctggaa
gccgacttcgacgaggaccgcatcgaggccgccaaggaagacaaggagcgcgccgaggac
tacctcgaacaggtcgaacccaagctcgaagacctccgcgagcgccgcgacgagctacag
gggcagattggcgcggcggagaacgctatcgaggaactggaggccctgcgcgagcagcgc
gagacggtggccgcgcgcctcgacgagctacaggagattcacgacgaggtcgccgagctg
gaggcgacgtacggagacctgcgcgcggagctgcgccagcagaacgtcgcgaaactggag
cgcctgctgaacgagacgttcgaactggtctaccagaacgactcgtacgcccgcatcgag
ctctccggggactacgagctcaccgtctaccagaaggacggcgagccgctggaacccgag
cagctctccgggggcgagcgcgcgctgttcaacctcagcctgcggtgtgccatctaccgc
ctactcgcggagggcatcgacggcgaggcgccgctcccgccgctcatcctcgacgagccc
accgtcttcctcgactcggggcacgtctcccagctcgtcgaactggtcgagcagatgcgc
cggatgggcgtcgagcaaatcgtcgtggtgagccacgacgacgaactcgtggacgccgcc
gacgacgtggttcgcgtggagaaggacgcgacaacaaatcgctcccgcgtggtgcgggac
gccgaggaagtgctggcggactag
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