Halobacterium hubeiense: Hhub_1873
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Entry
Hhub_1873 CDS
T04202
Symbol
tfeA
Name
(GenBank) transcription initiation factor TFE
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hhb
Halobacterium hubeiense
Pathway
hhb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hhub_1873 (tfeA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhb03021
]
Hhub_1873 (tfeA)
Transcription machinery [BR:
hhb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Hhub_1873 (tfeA)
Prokaryotic type
Archaeal type
TFE
Hhub_1873 (tfeA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DNA_ligase_ZBD
Zn_ribbon_6
DUF7129
zf-Mss51
Zn_ribbon_CLPX_N
Zn_ribbon_8
NRDD
Zn_ribbon_3
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
CQH52667
UniProt:
A0A0U5H556
LinkDB
All DBs
Position
I:complement(813825..814343)
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AA seq
172 aa
AA seq
DB search
MAFEELLDDPVVQKYLHELVGPKGMPVAVSPPDGEVTDEELAERLGLELNDVRRALFILY
ENDLATYRRVRDEDSGWLTYLWTFEYDNVPENLREEMDRLLEALVERREYELNNEFYLCE
VCSIRFEFGEAMDLGFECPECGSPVEAMENTDLVEAMDERIENLRSELGVRA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggagctactcgacgaccccgtggttcagaagtacctccacgagttggtc
gggccgaaggggatgccggtggcggtgtccccgccggacggcgaggtgaccgacgaggag
ctcgccgagcggctcgggctcgaactgaacgacgtgcgccgggcgctgttcatcctctac
gagaacgacctcgcgacgtaccgccgcgtccgcgacgaggactcggggtggctcacctac
ctctggacgttcgagtacgacaacgtcccggagaacctccgcgaggagatggaccggctg
ctggaggcgctcgtcgagcgccgcgagtacgagctgaacaacgagttctacctctgtgag
gtgtgttcgattcgcttcgagttcggggaggcgatggacctcggcttcgagtgccccgag
tgcgggtcgcccgtggaagcgatggagaacaccgacctcgtggaggcgatggacgagcgc
atcgagaacctccgcagtgaactcggcgtgagggcctga
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